Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1923 ATGTCATGCTTTTGTGCAAAGTGGAAACTTGAAACCCAATTGTCGGGCAAGCGCGTGGGTCTAAGAGTGGAGGAAGAAGGAGTGATTAATCAAGAAATGGAGAATTCAGTGTTGTTTGGTGAACTGAATTTGAAGGACACAGAGCTAAGGTTGGGATTGCCCGGCAGTGAGGAGGCCGAGAAATGTTGCAGTGTTATTCAATGCAAAAAGAGATGTTCACCGGAGGAAACCAGCGCTGACGAGGAGTCGCTGAGTTGTAATGGATCTAACACCACAAGTGATCATGCTGATCGATTAGAGAATAAGCCTCCAGCAAAGGTACAAATAGTGGGATGGCCACCAGTCCGATGTTTCAGGAAGAACAGTGCACAACAGAAGGGTGAAGAAAGTGGAATGTATGTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGGAAGATAGATCTCAAGTGTTACAACAGCTACCCACAACTCCTCAAGGCCTTGGAAGATATGTTCAACTGCACTTTTGGTGAATATTCAGAAAGGGAAGGGTACAAAGGATCTGACTATGTCCCAACATATGAAGACAAGGATGGAGATTGGATGCTTGTTGGAGATGTTCCATGGGAGATGTTCATGTGCTCCTGCAAGAGGCTCAGAATCATGAAGGCATCAGAAGCTAAGGGGTTGGGTTGTTTATGA 684 0.4547 MSCFCAKWKLETQLSGKRVGLRVEEEGVINQEMENSVLFGELNLKDTELRLGLPGSEEAEKCCSVIQCKKRCSPEETSADEESLSCNGSNTTSDHADRLENKPPAKVQIVGWPPVRCFRKNSAQQKGEESGMYVKVSMAGAPYLRKIDLKCYNSYPQLLKALEDMFNCTFGEYSEREGYKGSDYVPTYEDKDGDWMLVGDVPWEMFMCSCKRLRIMKASEAKGLGCL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1923 227 FunFam Auxin-responsive protein 126 227 - -
Bisa07g1923 227 MobiDBLite consensus disorder prediction 79 94 - -
Bisa07g1923 227 MobiDBLite consensus disorder prediction 79 103 - -
Bisa07g1923 227 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 42 222 IPR003311 GO:0005634|GO:0006355
Bisa07g1923 227 Pfam AUX/IAA family 47 225 IPR033389 -
Bisa07g1923 227 SUPERFAMILY CAD & PB1 domains 122 217 - -
Bisa07g1923 227 Gene3D - 125 227 - -
Bisa07g1923 227 ProSiteProfiles PB1 domain profile. 131 218 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1923 Bisa-ChrBisa07 46484049 46485190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1923 121 224 B3 DNA Binding Superfamily AT2G46530 33.962 3.51e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa07g1923 AUX_IAA 8.8e-54 CL0072