Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1920 ATGGCTAATAACCCTCCCGAGGCTCCAACCGACGACTTCTTCGAACAAATCCTCGGACTCCCTACTTTCGCTTCCATTGACTCCGGCTTGGCTGGAACTGATGGTGGCTTGGCGGGTACGGCTTCTCCTGCTCCCATGATGCTGCAGCTCAACTCCGGCGATGCTACCGGCCACCCGACCGCCGGTGGTGCAGGCGGTAGCACTGGGTTTCATGGACCAGTGTACCAGTTAGGCCTGAGCTTGGAGCAAGGAAAAGGAGGGTATTTTAAGCCGGAGGAGCCTTCGGGGAGTGGGAAGCGGTTTCGCGACGATATCGTTGATGGTAGAGCTAAGAATGTTTTTCATGGGCAATCTATGTCCACTACTGTTCCTATTGCTCCGCATCCACCAACAATGCGTCCAAGGGTGCGGGCAAGAAGAGGACAGGCTACAGATCCACATAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATCAGGGCCTTGCAGGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGCGGAGCTGGTGCTGTGGCACCATTGGTGACTGACATCCCGTTATCATCTGTGGAGGAGGATGGGAGTGAAGGTCGAAATCCAGCAGTTTGGGAGAAGTGGTCGAATGACGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGAGCTGCCATGCAGTTCCTGCAATCAAAGGCTCTCTGCATAATGCCCATCTCACTCGCATCAGCAATATATCACTCACAACCACCGGACACCTCTAGTAGCATAGTGAAGCCTGAAACTAATCCCCCTTCATAA 897 0.5139 MANNPPEAPTDDFFEQILGLPTFASIDSGLAGTDGGLAGTASPAPMMLQLNSGDATGHPTAGGAGGSTGFHGPVYQLGLSLEQGKGGYFKPEEPSGSGKRFRDDIVDGRAKNVFHGQSMSTTVPIAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEDGSEGRNPAVWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSSIVKPETNPPS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1920 298 FunFam Basic helix-loop-helix transcription factor 137 199 - -
Bisa07g1920 298 SMART finulus 148 197 IPR011598 GO:0046983
Bisa07g1920 298 MobiDBLite consensus disorder prediction 120 146 - -
Bisa07g1920 298 Pfam Helix-loop-helix DNA-binding domain 147 191 IPR011598 GO:0046983
Bisa07g1920 298 Gene3D - 137 199 IPR036638 GO:0046983
Bisa07g1920 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Bisa07g1920 298 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 276 - -
Bisa07g1920 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 201 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1920 Bisa-ChrBisa07 46461097 46465227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1920 8 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 66.049 3.29e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1920 HLH 1.1e-07 No_clan