Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1895 ATGTTTCCTGCTGCAGCAATGTCCAATTCCACTTCGCTGTCCGAAGAACCCACTGTCTCTTCGAGTACTAAAGTTCAGAACTTCACTGCATTAAACCATGTCGTTTCAGTTTCAACCATTCCTCCTCAGCAACCTCAAAAGATAAAGAGAAAAAGAAACCTCCCAGGAAATCCAGACCCAGATGCTGAAGTGATTGCTTTATCCCCAAAGACCCTCATGACCACCAATAGGTTCGTGTGTGAGATCTGCAACAAGGGTTTTCAGCGAGATCAGAACCTTCAGCTACACAGGAGAGGCCATAACCTTCCATGGAAGCTGAAGCAAAGGAACAGCACAGAGGTGAAAAAGAGAGTCTACGTTTGCCCTGAGCCTTCCTGTGTTCACCACAATCCCTCAAGGGCTCTGGGTGATCTTACTGGAATTAAGAAACACTACTGCAGAAAACATGGCGAGAAGAAGTGGAAATGTGACAAGTGCTCCAAAATCTACGCGGTTCAGTCAGATTGGAGAGCTCACTCCAAAACCTGTGGAACTAGAGAATATAGATGTGATTGTGGAACCCTTTTCTCCAGGAAGGACAGCTTCTTAACACACAGGGCATTCTGTGACGCACTGGCTCAAGAAAGTGCAAGAGTGAGGGCAAACCAACTAGTTACCACAAATCCCCTATTCCAATCTCTTTTCCCTTTCCAAAACCAGATCTTTACGAACCCCTGGGACCCATCTCAGGAAAACCCTAACCCTAGCAACTTCCATAACCATAATGATAATGCCCTCCAAATGAAGCCTCAAATTCAAAGCTTTCAGATCCCCTCTCTCTGTGCTCCCTCATTGCTTCAAGAGAGCATGATAAACTCACCCTTAGGGATAGAGACCCTCCTCCGTGTGCCCTCAAACGCCGCCACGTCACCCCACCTGTCAGCCACTGCGCTCCTCCAAAAGGCTGCAACTGTCAGTGCCACTGCAATCTCAGGCCCAGGTGCTGCTGTTGGGCCACAGTCCACAATGGGTCACGGGACTCAGCCCAGCGTGGCCGAGTTCGGAACAGTGACTCAGATGGACTCGGTGGGTCACGAGTTCGCGAGAGAGCTGTTGACCCGGAATATAAAGAGTGAACGTCTCACGCGGGACTTCCTGGGTCTCACCGCCGCCGATGCCCACGGCGGTCACGCAGGAAACAGCGGCGGCGTTGACGTTATCGTGGACACGAAGGACATGCTATCCTTCGCGGGAGGCGTAGAGTACCAACAGTACCACCACTTGCCGTTCAAGTCCGAACAAGGTTTTGGATTCTTTGGGACTACCACTGCCCCGGAGACTTGGGGGAATTCTTAA 1335 0.5049 MFPAAAMSNSTSLSEEPTVSSSTKVQNFTALNHVVSVSTIPPQQPQKIKRKRNLPGNPDPDAEVIALSPKTLMTTNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSTEVKKRVYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKIYAVQSDWRAHSKTCGTREYRCDCGTLFSRKDSFLTHRAFCDALAQESARVRANQLVTTNPLFQSLFPFQNQIFTNPWDPSQENPNPSNFHNHNDNALQMKPQIQSFQIPSLCAPSLLQESMINSPLGIETLLRVPSNAATSPHLSATALLQKAATVSATAISGPGAAVGPQSTMGHGTQPSVAEFGTVTQMDSVGHEFARELLTRNIKSERLTRDFLGLTAADAHGGHAGNSGGVDVIVDTKDMLSFAGGVEYQQYHHLPFKSEQGFGFFGTTTAPETWGNS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1895 444 Gene3D Classic Zinc Finger 118 202 - -
Bisa07g1895 444 FunFam protein indeterminate-domain 5, chloroplastic-like 132 211 - -
Bisa07g1895 444 SUPERFAMILY beta-beta-alpha zinc fingers 77 174 IPR036236 -
Bisa07g1895 444 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Bisa07g1895 444 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 100 IPR013087 -
Bisa07g1895 444 FunFam protein indeterminate-domain 12-like 57 125 - -
Bisa07g1895 444 Gene3D Classic Zinc Finger 78 117 - -
Bisa07g1895 444 SMART c2h2final6 119 149 IPR013087 -
Bisa07g1895 444 SMART c2h2final6 78 100 IPR013087 -
Bisa07g1895 444 SMART c2h2final6 154 174 IPR013087 -
Bisa07g1895 444 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 29 384 IPR031140 -
Bisa07g1895 444 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1895 Bisa-ChrBisa07 45969883 45972439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1895 25 415 IDZ Gene Family AT4G02670 52.723 3.24e-126 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g1895 None None None