Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1894 ATGAATTATCATTATCCAGTGAAGGAAGAGTACTTGGAAGCGTCTTCATCTCAATCAGGAGGTGAAGCAGCAACAATTCCCCCTCCGCTGCCAATGGAGGGGCTTCACGAGACAGGGCCACCGCCATTTCTGACGAAGACTTTCGATGTGGTGGACGATCCGACCACCAATTTCATAGTTTCGTGGAGCAGAGGTGGCGCTAGCTTTGTCGTTTGGGATCCACATGCCTTCTCTACCAGTCTCCTTCCCAGATACTTCAAGCACAACAATTTCTCAAGCTTTGTCAGGCAATTGAACACTTATGGATTTAGGAAAATTGATCCAGATAGATGGGAGTTTGCGAATGAAGGGTTTCTGAGAGGACAGAGGCATCTTTTGAGGAACATAAGGAGAAGGAAAGCACCTTCTAATCCTACTCTTTCCCAACAAGCACAACAAGGTCATTGTGTTGAAGTAGGCAGGTTCGGACTAGACGAAGATATTGACCGTTTAAGGCGAGACAAGCAGGTGTTAATGATGGAGTTGGTGAAGCTTAGGCAGCAGCAGCAGAATACTAGAGCATACCTTCAGACAATGGAGCAAAGGTTACAAGGCACAGAAATGAAGCAGCAACAGATGATGGCTTTCTTAGCCAGGGCCATGAAAAGTCCAGCCTTTCTGCAGCAGCTACTCCAACAGAAGGACAAGAGAAAGGAGCTTGAAGAAGCCATAACGAAAAAGAGAAGAAGGCCAATTGAACAAGGACCTAGTGGGGTTGGTGAATCAAGCAGTGGAGTGGGAGGAATGAACCCTGTGAAAGCTGAACCATTAGAATTTAGGGACTATAGTTTTGAAGTATCAGAGCTGGAAGTGTTAGCTATGGAAATGCAGGGAATTGGAAGGGGAAGAAGAGAGCAGGAGGCGCCAGAAGAACCACAGGAGAGGCTGGACAAAGAACTTGATGAAGGTTTCTGGGAAGAACTATTTAGTGAAAATTTTGAGGGTGAAATAGACATTCCAAGCACAGAAGGTGAAGATGAAGATGTCAATGTCTTGGCCCATCGCTTAGGTTACTTGGGTTCAAGTCCTAAGTAA 1074 0.4581 MNYHYPVKEEYLEASSSQSGGEAATIPPPLPMEGLHETGPPPFLTKTFDVVDDPTTNFIVSWSRGGASFVVWDPHAFSTSLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGQRHLLRNIRRRKAPSNPTLSQQAQQGHCVEVGRFGLDEDIDRLRRDKQVLMMELVKLRQQQQNTRAYLQTMEQRLQGTEMKQQQMMAFLARAMKSPAFLQQLLQQKDKRKELEEAITKKRRRPIEQGPSGVGESSSGVGGMNPVKAEPLEFRDYSFEVSELEVLAMEMQGIGRGRREQEAPEEPQERLDKELDEGFWEELFSENFEGEIDIPSTEGEDEDVNVLAHRLGYLGSSPK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1894 357 FunFam Heat shock transcription factor 1 36 133 - -
Bisa07g1894 357 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 253 IPR027725 -
Bisa07g1894 357 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1894 357 MobiDBLite consensus disorder prediction 239 265 - -
Bisa07g1894 357 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1894 357 Gene3D - 35 133 IPR036388 -
Bisa07g1894 357 Coils Coil 161 181 - -
Bisa07g1894 357 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1894 357 Coils Coil 223 243 - -
Bisa07g1894 357 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Bisa07g1894 357 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1894 357 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1894 357 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1894 Bisa-ChrBisa07 45958810 45960607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1894 24 355 HSF AT3G22830 54.891 4.87e-132 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa07g1894 HSF_DNA-bind 2.4e-31 CL0123