Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1845 ATGACAGCGCCGCCAAGTAGCCAGCTCCAAAGCATGTTGCAGGCGGCGGTGCAATCGGTTCAATGGACTTATAGTCTCTTCTGGCAACCTTGTCCACAACAAGGGATCTTGGTGTGGGCGGATGGGTACTACAATGGGGCAATTAAGACTCGCAAAACGGTGCAACCAATGGAGGTTAGCGCCGAGGAGGCCTCTCTCCAAAGAAGCCAGCAACTCAGGGAGCTCTATGAATCGTTGTCGGCCGGAGAGACCAATCCGCCGGCACGACGCCCTTGCGCCGCCTTGTCACCCGAAGACCTCACCGAATCGGAATGGTTCTATTTGATGTGTGTCTCTTTTTCCTTCCCTCCTGGTGTCGGGTTACCGGGAAAGGCATATGCCAGGAGGCAGCATGTATGGCTCGCTGGTGCAAACGAGGTGGACAGCAAAACATTTTCTCGAGCTATCCTTGCTAAGAGTGCTCGTATTCAGACCGTGGTCTGCATTCCTCTCTTGGACGGCGTCGTAGAGCTGGGCACCACAGATAAGGTTCAAGAAGAACTTAGTTTTATCCAACATGTGAAGAGCTTCTTCACAGACCACCCACAGCAACAGCAGCTGCAGCACCACCCTCCGCCGCCAAAGCCTGCCCTGTCGGAGCACTCGACCTCCAACCCGACCTCCTCTTCCGATCACTCCCGCTTCCACCCCGCTCCCATTCCCCTCGCCATGTACTCTGCGGTGGACCCGCCACCCGCCACCAGTGCTCCCGACAACCACATGGATGAAGACGATGACGACGAAGAAGCTGACTCCGACTCCGAAGCCGAAACAGCCCCCAACAGCCACCCAATGTCAGCGGCGGCTGTGACAGCGGCGGAGCCTAGCGAGCTGATGCAGCTGGAGATGTCGGAAGATATACGGGTGGGATCACCGGATGATGGGTCAAACAACCTTGACTCCGACTTTCACTTGCTGGCGGTGAGCCACACAGGGAACCCCTCGGATCATGAGCGGAGAGCTGACTCGTGCAGGGCCGAGTCGACTCGGCGGTGGGATGACCGGGGGCTTCAACTACCAGCTTCAGAAGGTACTCCTCTGGAAGACCTGACACAAGAAGACACCCACTACTCTCAAACTGTGTCCACCATCCTCCACAACCAGTCCCTTCGGTGGGCCGAATCACCCTCCATCGGCTACATCACTGATTCCTCCCAATCCGCTTTCGCCAAGTGGACCACCCGCTCCGACCACCATCGCCCCCATCACCTCCACGTGTCCGTTGACGGCGCCTCTCAGTGGCTCCTCAAGTACATCTTGTTCACCGTTCCTTTCCTTCACGCCAAGTACCAAGACGACAACTCGCTCACGCCCCGGGATAGCGCCGACCCCGTCACGCGCTTACGTGGCAAGGGGACGCCTCAAGATGAGCTAAGCGCCAACCACGTGCTGGCGGAGCGACGTCGTCGCGAGAAGCTCAACGAGAGGTTCATCATTCTGAGATCGCTCGTTCCCTTCGTCACCAAAATGGACAAGGCTTCCATATTAGGGGACACCATCGAGTACGTGAAACAGTTACGCAAAAAGATCCAGGATCTGGAGGCACGGATCCGCCAGATGGAGGCCGATCAACAATCGAAGGAACAACAGAGGAGCCTGGTGCGGGTTGAATCCGACAAGAGGAAGATTAGGATCGTGGAGAGTGGAGGAATGAGGAAGCCGAAGACGGTGGAGGTATCGCCGCCGGTGTCGCCGACGCGAGCGGCGGTGACGACGTCGCTGCAGGTGTCGATCATAGAGAGTGATGCGCTGTTGGAGCTGGAGTGCGTAAACAGGGAGGGGTTGTTGCTGGACATGATGCAAGTGCTGCGAGAGATGCAGATAGAGGTGACGACGGCGCAGTCGTCGCTGAACAATGGAATGTTCGTGGCGGAGCTGAGGGCAAAGGTGAGGGAGAACGCGAACGGGAAGAAGGCCAGCATTGTTGAAGTGAAGAGAGCCCTGAATCAAATCATACCCCACAGCGGTTGA 2010 0.5726 MTAPPSSQLQSMLQAAVQSVQWTYSLFWQPCPQQGILVWADGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPARRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLAGANEVDSKTFSRAILAKSARIQTVVCIPLLDGVVELGTTDKVQEELSFIQHVKSFFTDHPQQQQLQHHPPPPKPALSEHSTSNPTSSSDHSRFHPAPIPLAMYSAVDPPPATSAPDNHMDEDDDDEEADSDSEAETAPNSHPMSAAAVTAAEPSELMQLEMSEDIRVGSPDDGSNNLDSDFHLLAVSHTGNPSDHERRADSCRAESTRRWDDRGLQLPASEGTPLEDLTQEDTHYSQTVSTILHNQSLRWAESPSIGYITDSSQSAFAKWTTRSDHHRPHHLHVSVDGASQWLLKYILFTVPFLHAKYQDDNSLTPRDSADPVTRLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLEARIRQMEADQQSKEQQRSLVRVESDKRKIRIVESGGMRKPKTVEVSPPVSPTRAAVTTSLQVSIIESDALLELECVNREGLLLDMMQVLREMQIEVTTAQSSLNNGMFVAELRAKVRENANGKKASIVEVKRALNQIIPHSG 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1845 669 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 470 519 IPR011598 GO:0046983
Bisa07g1845 669 Pfam Helix-loop-helix DNA-binding domain 473 520 IPR011598 GO:0046983
Bisa07g1845 669 Coils Coil 509 543 - -
Bisa07g1845 669 MobiDBLite consensus disorder prediction 213 227 - -
Bisa07g1845 669 Gene3D - 466 537 IPR036638 GO:0046983
Bisa07g1845 669 MobiDBLite consensus disorder prediction 446 470 - -
Bisa07g1845 669 MobiDBLite consensus disorder prediction 194 283 - -
Bisa07g1845 669 MobiDBLite consensus disorder prediction 326 350 - -
Bisa07g1845 669 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 472 543 IPR036638 GO:0046983
Bisa07g1845 669 MobiDBLite consensus disorder prediction 253 268 - -
Bisa07g1845 669 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
Bisa07g1845 669 PANTHER TRANSCRIPTION FACTOR TT8 2 667 - -
Bisa07g1845 669 SMART finulus 476 525 IPR011598 GO:0046983
Bisa07g1845 669 MobiDBLite consensus disorder prediction 321 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1845 Bisa-ChrBisa07 45210843 45217005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1845 301 667 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 40.054 1.48e-59 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1845 bHLH-MYC_N 1.7e-52 CL0161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1845 07 45210843 45217005 Bisa07g1845 07 45210843 45217005 ECH