Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1820 ATGATTCCTTGGGGTGGAGTCAGTTGCTGTCTGAGTGCAGCTGCTCTTTATCTTCTCGGGAGAAGCAGTGGCAGGGATGCCGAAATTCTTAAATCCGTTACCCGGGTCAGTCAGTTAAAGGAACTAGCGCAACTGTTAGATGCTGAAATATTACCTCTAGTTGTCGCAATTTCTGGAAGAGTTGGCTCTGAAACTCCAGTTAACTGCGAATTCAGTGGTTTAAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCATGGATACAAGATTCTGCTTTGATCCTATCCATGAGCAAAGAGGTTCCTTGGTATCTGGATGATGGAACTGCTCATGTTCACGTTGTTGGAGCTCGGGGGGCTACAGGCTTTGTATTACCAGTTGGAAGTGAAGCATTTGAAGAGTCAGGTCGATCACTTGTTCGGGGAACACTAGATTATCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCAATTGGCACGTCCTTGACAGTTGTTGGCGAGGCTGCCAAAGATGACATTGGAACGATTAGAATTCAGCGGCCCCACAAAGGTCCATTTTATGTCTCTCCCAAAACTATTGATCAGCTCATAGCAAATCTTGGGAAATGGGCAAGGTGGTATAAGTATGCATCTGTCGGCTTGACAGTTTTTGGTGCTTATCTAATAACTAAGCATGCTATTCAGTACATCTTGGAAAAACACCGCCGCCGTGAAATGCAGAAAAGGGTTCTTGCTGCAGCTGCTAAGAGGTCAGGACAAGATAATGAAGGTGAAAAGGCTGACAGCATTTCAGATGGTGCAAAAAAAGATCGTGCAATGCCAGATTTGTGTGTGATATGCCTTGAGCATGAGTATAATGCTGTCTTTGTTCCGTGTGGTCATATGTGCTGCTGTACAACTTGTTCTTCACACTTATCGAACTGTCCTCTATGCCGGCGGCGGATAGATCAACTTGTGAAGACTTTTCGCCATTGA 1020 0.448 MIPWGGVSCCLSAAALYLLGRSSGRDAEILKSVTRVSQLKELAQLLDAEILPLVVAISGRVGSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALILSMSKEVPWYLDDGTAHVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTVFGAYLITKHAIQYILEKHRRREMQKRVLAAAAKRSGQDNEGEKADSISDGAKKDRAMPDLCVICLEHEYNAVFVPCGHMCCCTTCSSHLSNCPLCRRRIDQLVKTFRH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1820 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
Bisa07g1820 339 PANTHER - 1 306 IPR044231 GO:0004842|GO:0016567
Bisa07g1820 339 FunFam E3 ubiquitin-protein ligase SP1 280 338 - -
Bisa07g1820 339 MobiDBLite consensus disorder prediction 262 282 - -
Bisa07g1820 339 Pfam E3 Ubiquitin ligase 85 233 IPR022170 GO:0004842|GO:0006996|GO:0016567
Bisa07g1820 339 CDD RING-HC_LRSAM1 292 335 - -
Bisa07g1820 339 Pfam Zinc finger, C3HC4 type (RING finger) 290 332 - -
Bisa07g1820 339 MobiDBLite consensus disorder prediction 267 282 - -
Bisa07g1820 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 338 IPR013083 -
Bisa07g1820 339 SUPERFAMILY RING/U-box 291 333 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1820 1 272 C3H Transcription Factor Family AT1G63900 77.372 1.26e-156 438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1820 07 44863259 44867286 Bisa07g1820 07 44863259 44867286 ECH