Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1804 ATGAAGGAGAAGGCTGATTCCCCAGTCGGAGTTCTTGACGACTATTTAAGGAGTTCGGAGTCAGAAACAAGCTGTTCCAATTCCAAAGAACCCACACTAGATTCTGAGTCTCAAGAAGATAAGTCAAAAGCAGCTTCTAGATGGCGTGGTTTTCTCCAATTATTGAGGACCAGATCAAAGAAACCTATAGCCACATTGCATCCTCTCAGCATCCTCAAGCTCTCCAAAAGAATGAGCAGTAGCATGAGGGAGACTATAGTGCCTGAGTGTCGCATAGGTGCAGATTCATCCCTCCACGGGTCACCCTGGAAGATCTTTACTCACCATGACATTCAAATGGCAACCAACCATTTCAGCCAAAAAAATTTGATTGGAAAAGGTGGTTATGCTGAAGTTTACAGAGGGTGTCTGCGAAATGGTCAGCTGGTAGCAATTAAACGGCTAACACGAGGAACACAAGATGAGATTATAGGGGATTTCTTAACAGAGTTAGGCATAATGGCGCATGTCAACCATCCCAATACTGCTAAGTTGGTTGGGTATGGTGTGGAAGGAGGAATGCATCTTGTTCTTGAATTGTCTGAAAAAGGGAGCTTAGCTTCAGTGCTTTATGGTTCGAAGGAGAAACTACCATGGTGTGTAAGGCACAAAATTGCATTAGGAACAGCAAAGGGTATGCAATATCTCCATGAGGGCTGTCATAGAAGAATTATCCATAGAGATATAAAGGCTGCAAATATCTTGCTCACGGAGGATTTTGAGCCACAGATTTGTGATTTTGGGCTGGCAAAATGGCTGCCGGAGAATTGGACTCACCACACCGTTTCAAAATTTGAAGGGACTTTTGGTTACTTAGCTCCTGAATACTTACTTCATGGCATAGTGGACGAGAAAACAGATGTATTTGCATTCGGTGTTGTGCTATTAGAGTTAGTCACAGGGCGGCGAGCCCTTGATTATTCCCAGCAGAGCCTTGTTTTGTGGGCAAAACCATTGCTGAAGAAGAATGATATTAGGGAGTTAATTGATCCTTCCTTAGCCGATGACTTTGACTCCCTTCAGATTCATCTGTTGCTCTTGGCAGCATCTTTATGCATACATCAATCCTCCATTCGTCGGCCCTCTATGAGACAGGTTGTACAGATTGTGCAGGGCAACCTTAGCGACTTCAAGTACGTGAAGAAAACTAGAGTCCCATTTTTCAGGAAAGTCTTGCAGGAACAGCTTCTCCATTCTGAATAA 1242 0.4372 MKEKADSPVGVLDDYLRSSESETSCSNSKEPTLDSESQEDKSKAASRWRGFLQLLRTRSKKPIATLHPLSILKLSKRMSSSMRETIVPECRIGADSSLHGSPWKIFTHHDIQMATNHFSQKNLIGKGGYAEVYRGCLRNGQLVAIKRLTRGTQDEIIGDFLTELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSEKGSLASVLYGSKEKLPWCVRHKIALGTAKGMQYLHEGCHRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDYSQQSLVLWAKPLLKKNDIRELIDPSLADDFDSLQIHLLLLAASLCIHQSSIRRPSMRQVVQIVQGNLSDFKYVKKTRVPFFRKVLQEQLLHSE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1804 413 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 397 - -
Bisa07g1804 413 MobiDBLite consensus disorder prediction 1 41 - -
Bisa07g1804 413 PANTHER OS08G0249100 PROTEIN 4 396 IPR046958 -
Bisa07g1804 413 ProSiteProfiles Protein kinase domain profile. 118 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1804 413 MobiDBLite consensus disorder prediction 17 32 - -
Bisa07g1804 413 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1804 413 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 89 192 - -
Bisa07g1804 413 Gene3D Phosphorylase Kinase; domain 1 90 192 - -
Bisa07g1804 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Bisa07g1804 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Bisa07g1804 413 SMART serkin_6 118 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1804 413 SUPERFAMILY Protein kinase-like (PK-like) 99 382 IPR011009 -
Bisa07g1804 413 Gene3D Transferase(Phosphotransferase) domain 1 195 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1804 Bisa-ChrBisa07 44535350 44537164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1804 106 385 Receptor kinase-like Gene Family AT1G53420 40.972 1.04e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa07g1804 Pkinase 1e-42 CL0016