Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1771 ATGAAGTGCAAGGGGGGTGTGCAACCTTGTTTAAAAGCAAAGGATAAGGCTTTCCAGCTTCGAACATACAATTTGATAAATTATTTTTTCATCCCAGTCATATTACTTATCTCAATTTTGTCCTGGCCCCACGGGGTTGGTTGGTTGGGGGCTGTCTGGGTAATTGAGCCTGGAAATGCAGCACAGAGAATGTGGGGGGTACAACCTTGTGCATTTTATTTGCAAAATGGGCATTGCAAGTTTGGCTCCACCTGCAAATTTGACCATCCTCTGGGGCCAATGAGATTCAGTTCTTCAACATCTCTTATTGATGTGCCGGTTTCTCCATACCCAGTTGAGTCTTTGCTCTCTACCCTGTCTCATCCAGCTACATCTTCAGAGCTTCGGCCTGAACGACCCATGTCAGGGTCCAAAAAGGAATCCTTTTCGATCCGGATGCCTTCTGCTGGAAATAACTCCGGCTCTCCTGTCAGTTTGATTTTATCCCAAGGTGGATCCGTCTCACTGTCTGATGCGCAACTCTCAAGTCAGAGTTCTGCCCCTCTAAGCAGTAGCAGAAACACTGGACAAGGTGGTGAGATACGAGGATCAGGCTAA 597 0.469 MKCKGGVQPCLKAKDKAFQLRTYNLINYFFIPVILLISILSWPHGVGWLGAVWVIEPGNAAQRMWGVQPCAFYLQNGHCKFGSTCKFDHPLGPMRFSSSTSLIDVPVSPYPVESLLSTLSHPATSSELRPERPMSGSKKESFSIRMPSAGNNSGSPVSLILSQGGSVSLSDAQLSSQSSAPLSSSRNTGQGGEIRGSG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1771 198 ProSiteProfiles Zinc finger C3H1-type profile. 64 92 IPR000571 GO:0046872
Bisa07g1771 198 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 65 90 IPR000571 GO:0046872
Bisa07g1771 198 SMART c3hfinal6 64 91 IPR000571 GO:0046872
Bisa07g1771 198 Gene3D - 58 134 - -
Bisa07g1771 198 MobiDBLite consensus disorder prediction 121 198 - -
Bisa07g1771 198 MobiDBLite consensus disorder prediction 141 198 - -
Bisa07g1771 198 SUPERFAMILY CCCH zinc finger 64 94 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1771 Bisa-ChrBisa07 44213791 44216251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1771 70 90 C2H2 Transcription Factor Family AT3G02830 71.429 5.14e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa07g1771 zf-CCCH 1.6e-09 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0375 03 4813997 4817342 Bisa07g1771 07 44213791 44216251 CCT
Bisa07g1771 07 44213791 44216251 Bisa07g1771 07 44213791 44216251 ECH