Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1770 ATGGAGTTGTACGGTCGAAATCCGCGGAGGAATGGCTCGCAACCGGGTTATCCGTCTGAGTGGCGCCCAGCAACCGGCGACACTGGGCTAGAAGAGTCGATGTGGCAATTAGCACTCAGCAGCGGCGAGTCATACCCGGAGCGACCCGGCGTGCCGAATTGTGTTTACTACATGCGAACCGGGTTCTGTGGATATGGTGGCAGGTGTCGTTACAATCATCCCCGTGATCGCGCTGCGGTTGCTGCTGCTGTAAGAGTTACAGGGGAGTACCCAGAACGGGTGTGGGAACCTCCATGTCAGTATTATTTAAAAACTGGAACCTGTAAATTTGGTGCATCCTGTAAATTCCACCATCCGAAACATGGAGGTGGATCTTTAGGTCAAGCTTCACTAAATATTTATGGATACCCGTTACGGCCGGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCATCCTCAACCAGCTGGCACATCGATGTCGGCATCTGCACCTCAATTTTATCAACAGGTGCAATCTCCAACGATTCCTCTGACTGAACAGTATGGGGGGGCATCCACCAGCTTGAGAGTGGGAGTGGCCAGGCCTCCAATGTTGCCTGGTTCATATGTGCAAGGGGCTTATGGTCCAGTACTTCTTTCCCCAGGGGTTGTTCCCTTTCCAGGATGGAGTCCTTATTCGGCACCTGTAAGTCCTGTGTTGTCTCCGGGTGCTCAACCTGCTGTTGGCGCTAGTTCTCTATATGGAGTGACCCAGATGTCTTCATCAACATCAGTTTATGCCAGACCATATACTCCTATGCTCTCTTCTTCTGGCCCTTCAAGCAGCAGCCAGAATGAACAACTATTTCCTGAAAGACCTGGTGAACCTGAATGCCAATATTATATGAGAACAGGGGACTGCAAATATGGATTAGCTTGTCGGTATCACCATCCTAGGGATCGTGCTGCAACACGGCCACTTCTCAGCCCTGTTGGTCTTCCTTTACGTCCGTTGTAG 1035 0.5024 MELYGRNPRRNGSQPGYPSEWRPATGDTGLEESMWQLALSSGESYPERPGVPNCVYYMRTGFCGYGGRCRYNHPRDRAAVAAAVRVTGEYPERVWEPPCQYYLKTGTCKFGASCKFHHPKHGGGSLGQASLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSMSASAPQFYQQVQSPTIPLTEQYGGASTSLRVGVARPPMLPGSYVQGAYGPVLLSPGVVPFPGWSPYSAPVSPVLSPGAQPAVGASSLYGVTQMSSSTSVYARPYTPMLSSSGPSSSSQNEQLFPERPGEPECQYYMRTGDCKYGLACRYHHPRDRAATRPLLSPVGLPLRPL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1770 344 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 97 120 IPR000571 GO:0046872
Bisa07g1770 344 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 300 325 IPR000571 GO:0046872
Bisa07g1770 344 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 50 75 IPR000571 GO:0046872
Bisa07g1770 344 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 141 166 IPR000571 GO:0046872
Bisa07g1770 344 Gene3D - 286 334 - -
Bisa07g1770 344 Gene3D - 43 88 - -
Bisa07g1770 344 Gene3D - 92 177 - -
Bisa07g1770 344 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Bisa07g1770 344 SUPERFAMILY CCCH zinc finger 303 327 IPR036855 GO:0046872
Bisa07g1770 344 ProSiteProfiles Zinc finger C3H1-type profile. 98 121 IPR000571 GO:0046872
Bisa07g1770 344 ProSiteProfiles Zinc finger C3H1-type profile. 298 326 IPR000571 GO:0046872
Bisa07g1770 344 PANTHER PROTEIN PHOSPHATASE RELATED 38 343 - -
Bisa07g1770 344 SUPERFAMILY CCCH zinc finger 141 167 IPR036855 GO:0046872
Bisa07g1770 344 SUPERFAMILY CCCH zinc finger 97 120 IPR036855 GO:0046872
Bisa07g1770 344 SUPERFAMILY CCCH zinc finger 52 77 IPR036855 GO:0046872
Bisa07g1770 344 SMART c3hfinal6 298 325 IPR000571 GO:0046872
Bisa07g1770 344 SMART c3hfinal6 95 120 IPR000571 GO:0046872
Bisa07g1770 344 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Bisa07g1770 344 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Bisa07g1770 344 MobiDBLite consensus disorder prediction 279 295 - -
Bisa07g1770 344 MobiDBLite consensus disorder prediction 279 300 - -
Bisa07g1770 344 MobiDBLite consensus disorder prediction 1 25 - -
Bisa07g1770 344 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1770 Bisa-ChrBisa07 44211067 44213531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1770 1 343 C2H2 Transcription Factor Family AT5G18550 51.099 1.30e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa07g1770 zf-CCCH 9.7e-10 CL0537