Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1759 ATGAATGAAGCAGATCCAGATGCGGAAGTGATAGCTCTATCGCCGAACACATTGATGGCGAGGAACCGATTCGTGTGCGAGATCTGCAACAAAGGGTTCCAGAGGGACCAAAATCTGCAGCTGCATCGGAGAGGGCACAATCTGCCGTGGAAGCTGAGGCAGAGGGCGAGCAGCGAGGTGAGCAAGAAGAGGGTGTACGTGTGCCCGGAGGCCTCATGCGTGCACCATAACCCAGCTCGAGCACTGGGAGACCTAACAGGTATCAAGAAGCACTATAGCCGGAAGCATGGCGAGAAGAAATGGAAATGCGACAAGTGCTCTAAGAAATATGCCGTGCAATCCGATTGGAAGGCCCACCAGAAGACCTGCGGGACTCGCGAGTACAAATGCGACTGTGGCACCATATTTTCTAGGTTCACCCTCATACATGGATTTACTGTGAGAGACAGTTTTATCACGCACAGAGCATTTTGCGACGCATTAACTGAAGAAAACAACCGAGTGAAGCAGGGATTAACGACTGGAAATTCAAACTGCACAATGCCTCTAAGCACCACTCCCAACTCTGCAATTTCCGAATTCCATGTTCCCCAAGAACTTCTCCCTCTGCCATTCAAGTGTGGAGGCATGTTCTCCGCCACTTCCACTTCACTCTTCGCACGCCCAAATCCCATCCCTCCTTCTTCTTCATATTCTTCCTCTGCTCTTCACCTCACTTCCGACACCTCCTCTGTCTTCAGAGGAGGCACACTTTCTGGGTCTCCTCACATGTCCGCAACGGCTCTGTTGCAGAAAGCAGCTCAAATGGGTGCCACTGCCAGCAACAGTGGCATGAACTCTCCAATGATTCAGAGAGGCTTTGTGACATGCATGGCTGGTCCTGATCACCATATCACTAGACCACCCTATTATGACCACTTCCATTCCCACTCTGAATCTAACTTGGCCGGGATCAGTGGTGGTGGAGCGTTCGCTGGTCAATTGTTTCACAAGAGCCCACAAGAAGTTTCTCCACTGTTCGATACTAATAATCGATCCACAGTAAGTGATATGGGAATGGGAATGTTGAGCCAAATGTTGATGAAGAATGTTGCAGAAGAAGAGGGCAGTGACATGACGAGGGTTCATGACTTCTTGGGCGTAGGGGGTTCCACTTCAAGAGCACACAACTTAGGTGAATTTCATAGTAGCATCACCAATAACGAAGATTGGAGTTGGAAGCCACTATAA 1230 0.4967 MNEADPDAEVIALSPNTLMARNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRASSEVSKKRVYVCPEASCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRFTLIHGFTVRDSFITHRAFCDALTEENNRVKQGLTTGNSNCTMPLSTTPNSAISEFHVPQELLPLPFKCGGMFSATSTSLFARPNPIPPSSSYSSSALHLTSDTSSVFRGGTLSGSPHMSATALLQKAAQMGATASNSGMNSPMIQRGFVTCMAGPDHHITRPPYYDHFHSHSESNLAGISGGGAFAGQLFHKSPQEVSPLFDTNNRSTVSDMGMGMLSQMLMKNVAEEEGSDMTRVHDFLGVGGSTSRAHNLGEFHSSITNNEDWSWKPL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1759 409 FunFam protein indeterminate-domain 12-like 3 72 - -
Bisa07g1759 409 SUPERFAMILY beta-beta-alpha zinc fingers 23 122 IPR036236 -
Bisa07g1759 409 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Bisa07g1759 409 Gene3D Classic Zinc Finger 79 156 - -
Bisa07g1759 409 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 4 390 IPR031140 -
Bisa07g1759 409 Gene3D Classic Zinc Finger 4 74 - -
Bisa07g1759 409 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 46 IPR013087 -
Bisa07g1759 409 SMART c2h2final6 66 96 IPR013087 -
Bisa07g1759 409 SMART c2h2final6 101 121 IPR013087 -
Bisa07g1759 409 SMART c2h2final6 24 46 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1759 Bisa-ChrBisa07 44058812 44061761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1759 5 278 IDZ Gene Family AT3G50700 52.308 4.13e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g1759 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0811 03 10763892 10767021 Bisa07g1759 07 44058812 44061761 CCT
Bisa07g1759 07 44058812 44061761 Bisa07g1759 07 44058812 44061761 ECH