Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1758 ATGGGCGATGGCTCAGAGAGAGAAGGGTTTAATAAGTACAACAACTTGAAGTTGAACAACAACGCAGGGACAGGGACAGGGTGCGAGATAAAGGAGCAAGATCGGCTGCTTCCGATAGCGAATGTGGGGAGGATCATGAAGCAGATTCTGCCTCCGAACGCCAAAATCTCAAAAGAAGCGAAGGAGACGATGCAGGAGTGCGTGTCAGAGTTTATAAGCTTCGTCACAGGGGAAGCCTCCGACAAGTGTCACAAGGAGAAGAGGAAAACCGTCAATGGCGACGATATTTGCTGGGCCTTGGCCACTCTAGGGTTCGATGACTACGCCGAGCCGCTAAAGAGGTATTTGCTTAAGTACAGGGAATCTGAGGGCGAGAGAGCTAATAATCAAAATAGGAATAACAGTAACAATAACAGTAATAACAGTGATCATGAGATTAATTATGCTGAAGCGTATGCTGCTTCTTCCGGTGGTGGTGGTGGTGGTTCCTCGTTGATGAAGTTCAATGTGAGTGATAGGGGCAACAGCTCCTCTTACTCACGCCAATTTTCTAGCTTCTAA 561 0.4742 MGDGSEREGFNKYNNLKLNNNAGTGTGCEIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLLKYRESEGERANNQNRNNSNNNSNNSDHEINYAEAYAASSGGGGGGSSLMKFNVSDRGNSSSYSRQFSSF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1758 186 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 100 IPR003958 -
Bisa07g1758 186 SUPERFAMILY Histone-fold 33 143 IPR009072 GO:0046982
Bisa07g1758 186 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Bisa07g1758 186 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Bisa07g1758 186 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
Bisa07g1758 186 Gene3D Histone, subunit A 27 156 IPR009072 GO:0046982
Bisa07g1758 186 ProSitePatterns NF-YB/HAP3 subunit signature. 67 83 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa07g1758 186 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Bisa07g1758 186 FunFam Nuclear transcription factor Y subunit B-3 26 149 - -
Bisa07g1758 186 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 12 145 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa07g1758 186 MobiDBLite consensus disorder prediction 123 186 - -
Bisa07g1758 186 MobiDBLite consensus disorder prediction 128 146 - -
Bisa07g1758 186 MobiDBLite consensus disorder prediction 168 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1758 Bisa-ChrBisa07 44012710 44013270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1758 30 141 CCAAT-HAP3 Transcription Factor Family AT2G47810 75.893 5.96e-61 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa07g1758 CBFD_NFYB_HMF 1.4e-27 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1758 07 44012710 44013270 Bisa07g1758 07 44012710 44013270 ECH