Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1726 ATGAAGTTCTGTAAGAAATACGAGGAGTACATGCAAGGGCAGCAGAGGAAACTGCCTGGAGTGGGCATCAAGAAACTCAAGAAGATTTTGAAGAAATGCCGGAGAGACTATCAATCACACAGAGGCCTCAATGAAGCCCTCGGCGTCCAAACCTGCCCCGATCAATGCCCAGTATGTGATGGGAGCTTCTTTCCTTCCCTTCTCAACGAGATGACCGAAGTAGTAGGCTGCTTTAATGAGCGTGCCCAAAAGTTGCTGGAGCTACATCTTGCATCTGGCTTCAGAAGGTACTTATTCTGGTTGAAGGGGAAATCACGAGGAGACCATGCTGCCCTTATTCAAGAAGGTAAAGATCTGGTTACTTATGGACTAATTAATGCCATTGCAATTCGAAAGATACTCAAGAAATATGATAAGATTCATTATTCGAGGCAAGGGCAAATATTCAAGTCACAAGTTCAGAGTATGCACAAGGAAATTCTTCAGAGTCCCTGGCTTTGTGAGCTTGTGGCCTTCCACATCAATTTAAGGGAAACCAATAAGAACAAATCAATGAAGAAGGCACCTGCTTTCTTTGATGGATGTTCCCTCACATTTAAGGATGAAAAACCATCACTTACTTGTGAGCTCTTTGACTCCATCAAACTTGATATTGACTTGACTTGTTCTGTATGCTTGGACACGGTATTTGATCCTGTTTCTCTTACTTGTGGCCATATATTCTGCTACATGTGTGCTTGCGCATCTGCATCAGTAACAATTGTTGATGGACTTAAGACATCAAACCCTAAAGCAAAATGTCCTCTGTGCCGAGAGGGAGGAGTTTATGAAGGTGCTGTACGCTTGGAAGAGTTAAATATTCTGTTAGGCCGAAGCTGTCCGGAATACTGGGAACAAAGGCTTCAGAGTGAAAGGGTAGAGAGGGTTAAGCAAATAAAGGAGCACTGGGAATCGCAGTGTAGGGCCTTTGTGGGTGTCTAA 981 0.4373 MKFCKKYEEYMQGQQRKLPGVGIKKLKKILKKCRRDYQSHRGLNEALGVQTCPDQCPVCDGSFFPSLLNEMTEVVGCFNERAQKLLELHLASGFRRYLFWLKGKSRGDHAALIQEGKDLVTYGLINAIAIRKILKKYDKIHYSRQGQIFKSQVQSMHKEILQSPWLCELVAFHINLRETNKNKSMKKAPAFFDGCSLTFKDEKPSLTCELFDSIKLDIDLTCSVCLDTVFDPVSLTCGHIFCYMCACASASVTIVDGLKTSNPKAKCPLCREGGVYEGAVRLEELNILLGRSCPEYWEQRLQSERVERVKQIKEHWESQCRAFVGV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1726 326 CDD SPX_BAH1-like 2 147 - -
Bisa07g1726 326 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Bisa07g1726 326 ProSiteProfiles SPX domain profile. 1 151 IPR004331 -
Bisa07g1726 326 SUPERFAMILY RING/U-box 215 273 - -
Bisa07g1726 326 ProSiteProfiles Zinc finger RING-type profile. 222 271 IPR001841 -
Bisa07g1726 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 325 IPR033326 -
Bisa07g1726 326 Pfam Zinc finger, C3HC4 type (RING finger) 219 272 - -
Bisa07g1726 326 CDD RING-HC_BAH1-like 212 285 - -
Bisa07g1726 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 324 IPR013083 -
Bisa07g1726 326 SMART ring_2 222 270 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1726 Bisa-ChrBisa07 43360143 43363204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1726 219 271 C3H Transcription Factor Family AT4G28270 37.931 1.47e-06 46.2