Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1698 ATGGCTTCCAACCTCGTAACAAATATAACATTTGCCGTTCTACCTCTAATCTTTGCCTCTCTTGCTTTTGCAGACACCAAGCCCTCCACATTTGTCTCTCCCAGATCCCTATGTCAGTCTACCCCTGACCCTTCTTATTGCAACTCTGTGCTCCCTCCTCAAAACGGCACCGTCTATGACTATGGTCGCTACTCCGTCAGAAAGTCCTTATCACAGGCCCGCAGATTCCTGAACCTGGTCGACAAGTATCTCAAACGACGCTCTTCTTTATCCCCTGCCACCATAGGTGCCCTGGAAGACTGTCGCACGCTTGCCGAGCTAAACCTTGATTTCCTTTCAACTTCCTTTGAGACCGTCAATAAGACAACTAAGTTTCTACCCAATTTTCAAGCCCACAGTATCCAAACCTTGCTCAGCGCCATCTTAACCAATCAGCAGACCTGCTTGGACGGCCTTCAAGAAGCTGCTTCTTCTGGGAGTGTGGAAAATGGGCTTTCTGTCCCACTGTCTGACGACTACAAGCTTTACAGTATATCTTTGGCCCTTTTCACCAAGGGCTGGGTCCCCATAACTCAAAAGAAACAAAAAACACAGCATCCACATACCAAGAAACGACTTGGATCAAATGGTCGTTTGACTCTTGCCATGTCCAATAGAGCACGGGCCATCTACCAGGCAGTGAGCCGCAGAAAGCTTGATCAGACTACAACAGACGGCGGGCACGTTCCGGTCAAAGACGTCGTCACCGTCAGTCAAGACGGAACCGGAAACTTCACCACCATCAACGACGCCGTTTCTGCCGCTCCCAACAATTCTTCCCCTTGGGAAGGCTACTTCATGATCTACGTCACCGCCGGTGTTTACGAAGAATACGTGTCCATCGATAAGAAAAAGACCAACCTCATGATGATGGGAGATGGTATCAACAAGACCATCATCACCGGCAACCGTAGCTACGTCGACGGATGGACAACCTTCAACTCCGCAACGTTCGCGGTGGTAGGGTCAGGATTCGTGGGGATAAATATAACATTTCGAAACACAGCCGGGCCTGAGAAGCACCAAGCAGTGGCACTACGAAACGGCGCCGATCTATCGGCATTCTATGGTTGCAGCTTTGAGGGATACCAAGACACCTTATACACCCATTCCAATAGACAGTTCTACAGAGAATGCGATATCTACGGCACCGTTGATTTCATATTTGGTAACTCAGCGGTTGTATTTCAAAACTGCAACATTTATCCACGTCAGCCCATGCCCGGCCAGTTCAACGCCATCACTGCACAGAGCCGAATCGACCCCGGTCAGACCACTGGGATTTCAATCCATAACTGTACGATTCGACCGGCTGGTGATCTGGCGGCGAACCTTAGTGTGGGTGCGACGTATTTAGGGAGGCCGTGGAAGAATTTGTCGAGGACGGTGTACATGCAGAGCGTGATGGATAGTGTGATCGACGTGGCTGGTTGGCATGCATGGGATAGTGATTTTGCGCTGGCCACCTTGTATTACGCTGAGTTCAATAATAGTGGGCCAGGGTCCAGCACGGCCCAGAGAGTGACGTGGCCCGGTTTCCATGTGATTAACGCTACTGAGGCAGCTAATTTCACCGTCTCTAACTTCTTGCTCGGAGATGACTGGCTGCCCCACACTGGAGTCGCTTACACCAGTGACTTGAATTGA 1686 0.503 MASNLVTNITFAVLPLIFASLAFADTKPSTFVSPRSLCQSTPDPSYCNSVLPPQNGTVYDYGRYSVRKSLSQARRFLNLVDKYLKRRSSLSPATIGALEDCRTLAELNLDFLSTSFETVNKTTKFLPNFQAHSIQTLLSAILTNQQTCLDGLQEAASSGSVENGLSVPLSDDYKLYSISLALFTKGWVPITQKKQKTQHPHTKKRLGSNGRLTLAMSNRARAIYQAVSRRKLDQTTTDGGHVPVKDVVTVSQDGTGNFTTINDAVSAAPNNSSPWEGYFMIYVTAGVYEEYVSIDKKKTNLMMMGDGINKTIITGNRSYVDGWTTFNSATFAVVGSGFVGINITFRNTAGPEKHQAVALRNGADLSAFYGCSFEGYQDTLYTHSNRQFYRECDIYGTVDFIFGNSAVVFQNCNIYPRQPMPGQFNAITAQSRIDPGQTTGISIHNCTIRPAGDLAANLSVGATYLGRPWKNLSRTVYMQSVMDSVIDVAGWHAWDSDFALATLYYAEFNNSGPGSSTAQRVTWPGFHVINATEAANFTVSNFLLGDDWLPHTGVAYTSDLN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1698 561 PANTHER PECTINESTERASE 21 550 - -
Bisa07g1698 561 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Bisa07g1698 561 FunFam Pectinesterase 35 185 - -
Bisa07g1698 561 SUPERFAMILY Pectin lyase-like 244 558 IPR011050 -
Bisa07g1698 561 SMART PMEI_2 27 182 IPR006501 GO:0004857
Bisa07g1698 561 CDD PMEI-like_3 36 187 - -
Bisa07g1698 561 Gene3D - 242 560 IPR012334 -
Bisa07g1698 561 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Bisa07g1698 561 Pfam Plant invertase/pectin methylesterase inhibitor 35 182 IPR006501 GO:0004857
Bisa07g1698 561 FunFam Pectinesterase 241 560 - -
Bisa07g1698 561 NCBIfam pectinesterase inhibitor domain 3 184 IPR006501 GO:0004857
Bisa07g1698 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 185 IPR035513 -
Bisa07g1698 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1698 Bisa-ChrBisa07 42945301 42947090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1698 33 560 Carbohydrate Esterase AT4G02330 62.247 0.0 688