Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1685 ATGTGTGGGGGTGCCATCATCGCTGATTTCATTAGTCACCGGCACCTCCGTGGTCGCTGTATCACCGCCTCCGACTTCTGGCCTGACTCATTCCCTGACGACGGCGACTTCCCCTTGGATTTTTCTCTACCCACCCAGGATCACTCCCTTCCCCCTCAGAAACCCCAACTTTCCCCAGTTAGGGAGCAAATTGAGAGGCCCGTGAAGAGGCAGAGGAAGAACATCTACCGAGGGATTCGTCAGCGTCCGTGGGGTAAATGGGCTGCTGAGATTCGCGATCCAAGGAAAGGAGTTCGAGTTTGGTTGGGTACCTTCAACACCGCCGAAGAAGCCGCTAGGGCCTACGACAGAGAGGCTCGCAAAATCCGCGGCGAGAAAGCCAAGGTGAATTTTCCAAACGAAGACGACAATGACACTTCTGTTCAACCTCGTCGCAAGCGACCGCCTCCAAGACACTGCGCTTCTGATTTCAATAATGCTCCAAAAAGTCTGAATCTGGAGTTTGGTTATGATCTGAACCAAGTTGGGGAAACTTGTTCCCATGGGTCAGGGTCAGAAGGCGCTCACTCCACATCGGAGTTCATGGGCTGGAATCAGACGAAGGCGAGCGAGGAAGCGAAAACGAAGAGGATGGTGATGGAATGTGAGGAGGAACAGAATCAAGTGGAGAAGCTATCGGAGGAGATGATGGCGTACGAGAACTGCGTGAAGTTTTATGAGATTCCATACTACGATGCCCAATCCTCTGCGCGGAATAACGTTCAAGATAACGCGGTTGGCGGTGGTGACTTCTGGAGCTTCGACTATGAGGGCATTCCTGCATGTGTGACCTCGTCGGGCATGTGA 846 0.5296 MCGGAIIADFISHRHLRGRCITASDFWPDSFPDDGDFPLDFSLPTQDHSLPPQKPQLSPVREQIERPVKRQRKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGEKAKVNFPNEDDNDTSVQPRRKRPPPRHCASDFNNAPKSLNLEFGYDLNQVGETCSHGSGSEGAHSTSEFMGWNQTKASEEAKTKRMVMECEEEQNQVEKLSEEMMAYENCVKFYEIPYYDAQSSARNNVQDNAVGGGDFWSFDYEGIPACVTSSGM 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1685 281 PANTHER DNA-BINDING DOMAIN 62 227 IPR044808 GO:0003700|GO:0009873
Bisa07g1685 281 Gene3D AP2/ERF domain 75 133 IPR036955 GO:0003700|GO:0006355
Bisa07g1685 281 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Bisa07g1685 281 MobiDBLite consensus disorder prediction 126 152 - -
Bisa07g1685 281 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Bisa07g1685 281 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Bisa07g1685 281 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Bisa07g1685 281 MobiDBLite consensus disorder prediction 126 158 - -
Bisa07g1685 281 Coils Coil 208 235 - -
Bisa07g1685 281 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Bisa07g1685 281 Pfam AP2 domain 76 124 IPR001471 GO:0003700|GO:0006355
Bisa07g1685 281 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
Bisa07g1685 281 FunFam Ethylene-responsive transcription factor 2 74 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1685 Bisa-ChrBisa07 42761704 42762653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1685 1 133 AP2-EREBP Transcription Factor Family AT3G16770 54.412 4.12e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1685 AP2 4e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1685 07 42761704 42762653 Bisa07g1685 07 42761704 42762653 ECH