Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1684 ATGACACAACCTCTATCTACCCTTAATCTCCTTCTTTTACCTTCACTCTTGACTCTCGAATCTTCATTGTCTACCCCCTCTACAAAACGGCATGCACATGTGAAGAGAGAGGGGAAGATGGTTTCGCTGAAACTCCAGAAGCGGCTCGCCGCTAGCGTGCTCAAGTGCGGAAGAGGCAAGGTTTGGCTGGATCCCAATGAAGTCAATGAAATCTCCATGGCCAATTCTCGCCAAAACATAAGGAAATTAGTTAAGGATGGCTTCGTTATCAGGAAGCCAACTAAAATTCACTCTCGTTCTCGTGCTCGTAGAATGAAGGAGGCCAAGAGAAAGGGACGCCACTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACCAAAATCCTCTGGATGAGGAGGATGCGCGTGCTTAGGCGCTTGCTGCGCAAGTACAGGGAATCCAAAAAGATTGACAAGCACATGTACCATGACATGTACATGAAAGTGAAGGGTAATGTTTTCAAGAATAAAAGAGTTCTAATGGAGAGCATACACAAGTCCAAGGCTGAGAAGGCTAGAGAGAAGACTCTGTCTGACCAGTTTGAGGCCAAGCGTGCAAAGAACAAGGCAAGCAGGGAAAGGAAAATTGCTCGGAGAGAAGAGCGCTTGGCTCAGGGTCCTGGAGAAAGGGCATCAGTAGTGCCTGCTGCGCCTCCAGCTACAGCATCCCAGCCAGCTCAGGCAACCAAGAAATCTAAGAAGTGA 756 0.4854 MTQPLSTLNLLLLPSLLTLESSLSTPSTKRHAHVKREGKMVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGERASVVPAAPPATASQPAQATKKSKK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1684 251 SUPERFAMILY Ribosomal protein L19 (L19e) 42 183 IPR035970 GO:0003735|GO:0005840|GO:0006412
Bisa07g1684 251 Pfam Ribosomal protein L19e 43 184 IPR000196 GO:0003735|GO:0005840|GO:0006412
Bisa07g1684 251 MobiDBLite consensus disorder prediction 96 124 - -
Bisa07g1684 251 FunFam Ribosomal protein L19 96 231 - -
Bisa07g1684 251 Hamap 50S ribosomal protein L19e [rpl19e]. 42 188 IPR000196 GO:0003735|GO:0005840|GO:0006412
Bisa07g1684 251 PANTHER 60S RIBOSOMAL PROTEIN L19 40 227 IPR039547 GO:0003723|GO:0003735|GO:0022625
Bisa07g1684 251 MobiDBLite consensus disorder prediction 183 223 - -
Bisa07g1684 251 CDD Ribosomal_L19e_E 43 206 IPR033935 GO:0003735|GO:0022625
Bisa07g1684 251 MobiDBLite consensus disorder prediction 96 118 - -
Bisa07g1684 251 FunFam Ribosomal protein L19 40 95 - -
Bisa07g1684 251 Gene3D - 41 95 IPR015972 GO:0003735|GO:0005840|GO:0006412
Bisa07g1684 251 Gene3D - 96 228 - -
Bisa07g1684 251 MobiDBLite consensus disorder prediction 183 251 - -
Bisa07g1684 251 SMART Ribosomal_L19e_2 42 185 IPR000196 GO:0003735|GO:0005840|GO:0006412
Bisa07g1684 251 ProSitePatterns Ribosomal protein L19e signature. 46 65 IPR023638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1684 Bisa-ChrBisa07 42756506 42760008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1684 40 251 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.434 2.34e-128 360