Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa07g1672 | ATGGATGCTGAAACAGAGAAAAGCTGTAGGGATTGCCACACAAGGACAACCCCCCTATGGAGGGCTGGTCCTGATGGGCCTAGATCTCTTTGTAATGCATGTGGGCTACGATTCAGAAAGAGGAGGAGGGCTCTTGTGGGATTGGAGAATGGAAGAGCAGAGAAGCGCAGGAAGAGGATTCGAGCAAAACCGTTTGGAAGGCAATTCAAGTTAAAAGAGGAAGAAGAAGCGGCCATCTTACTCATGGCTCTTTCTTCCTCAGAAAGCAATAACATGCAGTCAAGGTTAATGGATAATACAGCAAGAACTTCAATACGGATGTTACTTTCAGCCCATCATCGTCTTGCTCTCCAGAGAGCATTTTGCTCTGCCTCCCGGAGTCGAACCGCTGACCCCGCCATTCATTCTGGAGAACGAGAAGCCGGCCCCGAAGTTCACAGAGGAGAACCTCAAGGAACAACCAGCACAACAGATGGCAAATCTGCGGAAACAGAGCACATGCCCAAAGATGAGTATTTCGAATCTCCCAAATCTCCGTATGACTCTTCCGCCAAACTGAAGAGTTCCGGGGTGAATCAGCGATTAGATCCAACGTTTCAACAAAAGCGAAATCAGGGATCGATAGCCTCAGAAGACGTGAGCTGTACTGGTCTAGATGGAACGCCGTGGCCAGAGGATAGGAGGAGTAGGGAGGAGAAGCTGGAGGATGAAAGAAAATACTATGAACATCACAAAGCCTCACCCTTATCGGAATTAGAAATCGCAGACTCTCGGAAGCCTATTACACGTGCGACGGACGGGACCGCCGACTCAGGAGCGGTTAGGGATGTGATTGGTTGGCTGCCGGAGCAGCTTGACACGGCGGAGGATTCTCTGAGGAGGGCTACTGAGATATGGAAACAGAATGCGATGCGCGGCGACCCAGATGCGCCACATTCACGGGTTCTCAGAGCTCTTCGTGGCGAAGATTTTTGA | 975 | 0.5046 | MDAETEKSCRDCHTRTTPLWRAGPDGPRSLCNACGLRFRKRRRALVGLENGRAEKRRKRIRAKPFGRQFKLKEEEEAAILLMALSSSESNNMQSRLMDNTARTSIRMLLSAHHRLALQRAFCSASRSRTADPAIHSGEREAGPEVHRGEPQGTTSTTDGKSAETEHMPKDEYFESPKSPYDSSAKLKSSGVNQRLDPTFQQKRNQGSIASEDVSCTGLDGTPWPEDRRSREEKLEDERKYYEHHKASPLSELEIADSRKPITRATDGTADSGAVRDVIGWLPEQLDTAEDSLRRATEIWKQNAMRGDPDAPHSRVLRALRGEDF | 324 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa07g1672 | 324 | MobiDBLite | consensus disorder prediction | 181 | 214 | - | - | |
| Bisa07g1672 | 324 | CDD | ZnF_GATA | 8 | 59 | IPR000679 | GO:0006355|GO:0043565 | |
| Bisa07g1672 | 324 | MobiDBLite | consensus disorder prediction | 162 | 176 | - | - | |
| Bisa07g1672 | 324 | MobiDBLite | consensus disorder prediction | 127 | 235 | - | - | |
| Bisa07g1672 | 324 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 4 | 42 | - | - | |
| Bisa07g1672 | 324 | MobiDBLite | consensus disorder prediction | 303 | 324 | - | - | |
| Bisa07g1672 | 324 | MobiDBLite | consensus disorder prediction | 132 | 146 | - | - | |
| Bisa07g1672 | 324 | Gene3D | - | 4 | 64 | IPR013088 | GO:0006355|GO:0008270 | |
| Bisa07g1672 | 324 | PANTHER | OS07G0675200 PROTEIN | 92 | 324 | - | - | |
| Bisa07g1672 | 324 | ProSiteProfiles | GATA-type zinc finger domain profile. | 3 | 39 | IPR000679 | GO:0006355|GO:0043565 | |
| Bisa07g1672 | 324 | Pfam | GATA zinc finger | 9 | 43 | IPR000679 | GO:0006355|GO:0043565 | |
| Bisa07g1672 | 324 | MobiDBLite | consensus disorder prediction | 310 | 324 | - | - | |
| Bisa07g1672 | 324 | SMART | GATA_3 | 3 | 61 | IPR000679 | GO:0006355|GO:0043565 | |
| Bisa07g1672 | 324 | ProSitePatterns | GATA-type zinc finger domain. | 9 | 34 | IPR000679 | GO:0006355|GO:0043565 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa07g1672 | Bisa-ChrBisa07 | 42595183 | 42597517 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa07g1672 | 6 | 89 | C2C2-Gata Transcription Factor Family | AT3G06740 | 43.636 | 3.77e-19 | 80.9 |
Transcription factors information