Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1662 ATGCCTCCACAATACATTGGTGGTGTAGCGAGTTCTTCAAGGGTACCATATGAGGAAAGTGGGGTTGAAGAAGGGGAGATGGGCTGCACAGGAGGACGAAATCTTGACCAAGTACATTCAGGCCAATGGGGAAGGCTCTTGGAGGTCATTGCCCAAGAATGCAGGTGGTCCTCAATAGCGAGTCATTTGCCTGGAAGAACAGACAACGAGATAAAAAACTATTGGAATTCTCACTTGAGCAGGAAAATCTACGCCTTCAGGAGGCCATCTAGTACAGATCAGACTCAGGACACACATACACCCAAGCCAAATGATGGCAAGCGTAAAGGTGGAAGAACCAGCCGTTGGGCCATGAAGAAGAACAAAAGCAACTTCCAGAAGGCCACGGAGACACCTAAAGGAAGTATTAGTGTTAGTAGTGATAATCAGAAAAGTAATGAAGCAGTTCCTTTACCACCCACACCAGCACTGGAGAACGAGAGCTTGTGTCTTAGTTCCATAGAGTTAGAGGACTTGATGGCTTTGGAGGGTAACGAAGACAAAGAAACAGAGAGCATAAAAGGGTGTAAGGAAGGCATTGATGGTGAAGGGGTGTTATGTTTTAATGACGTGATGGAGCCTGGCATGCAGGAGGAGGTGGAACTTGGAGGTGGGGTTGTGAAACTAAGTGAAGAGAGAGAAAGAAATGATGGTGATGATGATGAGGGGGTGAGATGTCCTTCTAATCACGAAATGGGAACAAGAGATGTGGGTTCGGTGTTTGATGAGAATAATAACTGGGACTGGGACTGGGACTGCGACGTGGGTGAAATGCAAATTGATCAGAATCGTGGCGAGCAGGATCAGTCACAGACAGAGGAGGACACACAGAAACTGCTGTCCTGGCTGTGGCAAGACGATGATTGGGAAAGCGGTTCTCACATGGCGGGAGAGATTGATCCCCAAACACATAATGCCATGCTTGATTGGTTCCTTTCTTGA 981 0.473 MPPQYIGGVASSSRVPYEESGVEEGEMGCTGGRNLDQVHSGQWGRLLEVIAQECRWSSIASHLPGRTDNEIKNYWNSHLSRKIYAFRRPSSTDQTQDTHTPKPNDGKRKGGRTSRWAMKKNKSNFQKATETPKGSISVSSDNQKSNEAVPLPPTPALENESLCLSSIELEDLMALEGNEDKETESIKGCKEGIDGEGVLCFNDVMEPGMQEEVELGGGVVKLSEERERNDGDDDEGVRCPSNHEMGTRDVGSVFDENNNWDWDWDCDVGEMQIDQNRGEQDQSQTEEDTQKLLSWLWQDDDWESGSHMAGEIDPQTHNAMLDWFLS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1662 326 MobiDBLite consensus disorder prediction 87 156 - -
Bisa07g1662 326 Pfam Myb-like DNA-binding domain 45 79 IPR001005 -
Bisa07g1662 326 SUPERFAMILY Homeodomain-like 54 84 IPR009057 -
Bisa07g1662 326 MobiDBLite consensus disorder prediction 225 254 - -
Bisa07g1662 326 Gene3D - 44 113 - -
Bisa07g1662 326 MobiDBLite consensus disorder prediction 225 242 - -
Bisa07g1662 326 CDD SANT 46 79 IPR001005 -
Bisa07g1662 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 83 IPR017930 -
Bisa07g1662 326 MobiDBLite consensus disorder prediction 1 25 - -
Bisa07g1662 326 ProSiteProfiles Myb-like domain profile. 46 79 IPR001005 -
Bisa07g1662 326 PANTHER MYB DOMAIN PROTEIN 55 54 242 - -
Bisa07g1662 326 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1662 Bisa-ChrBisa07 42455744 42461205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1662 55 119 MYB Transcription Factor Family AT2G47460 59.722 2.00e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa07g1662 Myb_DNA-binding 1.4e-07 CL0123