Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1659 ATGCTGGAGACCAGTTATCCGTCGCAAATGTTCCTCGGTATTCATTTCGTTCTCTTTGGTTTTGATCCTATTACCGAAAGCAAGGTTCGATTCAAGCTTGTAAATGGCGGTGGAGTTGATGTTGGTCAGTATAGCCCAAGTTGCACACATGTCATTGTGGACAAAGTTGCACATGATGATCCTGTCTGCGTTGCTGCAAGAAATGATGGGAAGACGCTTGTCACTGCACTGTGGGTTGATCATAGTGCTGATATTGGAATGCCTGTTGATGCTACCTCAGTTATGTACAGACCTCTAAAAGATTTAAAAGGTATACCGGGTGCCAAGAATTTGATTGTGTGTTTGACTGGTTATCAACGTCAGGATAGGGATGACATTATGACAATGGTTGGCCTAATCGGTGCACAATTTTCTAAGCCATTGGTGGCAAACAAGGTTACTCATCTTATATGCTACAAATTTGAAGGGGAGAAGTATGAGCTTGCAAAGAGATTGAAGACAATTAAGTTAGTTAATCATCGGTGGTTGGAAGACTGTTTGAAGGATTGGGTGCTTCATCCTGAAGATAAATATAGGAAGAGTGGTTATGAACTTGAGATGATGGCAGAAGAGGCTAAAGATTCTGAAGAAGAAGCTGAAGATCTCAAGCGAGGGCAATCTGGGGGAAGAAATGTAAGTAAGAGTCCCTTTAGTGCAAAACTGAGTACTGCTACAACCCTTAAATTGCCAAAACTAGTACGAGAGGCATCAACTACCTTCCCAGATTCTAATGCTCCTGAAGCACTGTTGAATAAGGGTCATGACACATTATTTATTCCTGAAAATGAGAACAGACCCAATGAAGCTAGAAGCTTTCATCAAGATGATCCAAAAATTAGTTTTGGGGATCATAGTGTTTCTTCGCATGATGCATCTGGTCAGCTACCTGACCTATGTGCCAAGACCACTAAACCTGGGAATACTGGTGTTCCAAAGGCAGCTGATGACCAGTGTACTTCTGAGTTTGCGGAGTTGGTTAATGACTTGAAATTAACTTCGGACAGTGTCGAAGCTCTTGTACATTCAGATGCAAAGGTTAGCACCACGAGTGACTCAAAGAAAAACTTAAAGAAAATTCCCCCTCCAAGGAAGTTAAATGAAAAATCAGCCAATGTATGTGGTACTTCTGCATCACCTTTAAATGATTTGAAATTTAGCATCAACCCAGAAACCTCTTCCAGCAAGGTGGAAAAGGCAAGCAACAGAATCAGCTTCCCCTGTGTTGAAGGTTCTGGGAAAGGAAGTGATTGGAGAGAGCCAAATAATGTATTGCCTCAAAAGAGGACGATTGAAGCTTCTACTAAATTGAAACCAAAGATGACTTTGGATGCAAAATTATCCATTGAAAGAACCCCGTCACCAAATGGTGTTAATCAAGGATTGAAACTCACATCTCTGATGGATGAACAACCTGAGATTGAAGACCACTTTTCTGTTGGCAAAGGTGGTATGAAGAACTTAGAAACTGTGAGCTCAGAGTCTGTGCAGTATGATGATGCCTATCAAAATTCAACTCAAAGATACGCTCAGAGCTTAACTGAGCCTAAAATTAATGGCAAGCCAGATATTGCTGGTTTTGGCATGGGTGAGGTTGCTCAAGATGGTACTGAAACAAAGCCACATGATGCCAAGAACGATCTTGAATGCTCATATCAAAGTAACAAGAAGTGTCAGAATGAGGAATCAACTGGTCTTACTACTCTGGATCTATGCAATAAAGTAAGTGATAAGTTGATTAAAAAATCACCCCGCAAGAAGACAGTTGCCAAGAAATGTTTGGGCTCTAGACGAAAATTAGGTGCTATTGCTAAACAAAAGGGTTTGATATCATTGAATGAAAGTACACCTGGAGGTAATACTGCAAGTCGTTTCAATGTATGCAAAGAGACAGCTTCCTCTGATGACAAGAAGCTTCATACATCCTCTAAAATTGTTGATGCTGAAACATCATCAGAGCTGGAAAGAGTCAGTAAATCTGCAGAAAATGCTGGTGGCGGAGAATTTCAGGATGATGAAACGGAGGCTCAAGATGAAAAATGTGAATATAAGGCAATGGCAATTGATGAAAACAATGATGAATTCGTTCATCTTTCAAAAAAAGCAGATGCACAGACACAGAAATCGGAAGCAATTCAGCATATACCAAAATGTGAAGAAGCAGAGCCCCCAATAGAAGGCACAAATGTAACTGAACAGAGTGTACTTGAGCAGGTAGACTCGACCTCAAAAGTAAAAGAAAAGCAAAAGGGGAGAAAACTTGCAGGTAGAAACAAGACTACAGTTGGCAAGGATGTGATGAAGTCTAAGGAGGGTGTATACGGGGCAAAGATTGACAATGGGGGGAAAGATAAGGCAGAGATGGAAACCCTTGAAAAAATGTCACTTCCTCATGGTAGAAATGACAGCTCAGCTGCACCAGCAATTAATTCAGAGAATTTTCGAGAAGTGGAAAAGGAAAACAGACCAATTGATGGAGAGAAGGATACTGGGGAAGGTATAAGTATTAGAAATTCAGTTATTAAAGCTAGTGTAAACCCAGCAAAGATGCAAAAGGCTAAGAAATCGGCTCTTAAATCATCTGTATCAGAAGATGACAAAAGAGTGAAGAGAGAAGCTGCATGTTTTATAGTAAGTGGGCATCGCCTACAGCGAAAGGAGTTTCAACAAATTATTAAGCGTTTGAAAGGTAGGGTTTGCCGTGATTCTCATCAGTGGTCATATCAGGCAACACACTTCATAGCTCCAGATCCCATACGCCGGACAGAGAAATTTTTTGCTGCTGCTGCATCAGGAAGGTGGATTCTTAAAACTGATTACTTAACTGCCTGTAACCAGGCAGGAAAGTTCTTGGCAGAAGAACCTTATGAGTGGCACAAGAGCGGCCTTAGTGAGGATGGTGCAATCAATATGGAAGCTCCAAGAAGATGGCGGCTGTTGAAAGAGAGGACGGGTCATGGTGCCTTATATGGAATGCGAATTATTATCTATGGGGATTGCATTGCCCCACCTTTGGACACTCTGAAGCGAGTACTTAAAGCAGGAGATGGAACTATCGTAGCAACCTGTCCTCCTTATACTCGCTTCCTTGATACCAGAATCGACTATGCCGTAGTCAGCCCTGGAATGCCCCGTGTTGATTTATGGGTCCAAGAGTTCTTAAAACATGAGATACCCTGTGTTTTAGCTGACTACTTGGTGGAGTACGTGTGCAAGCCCGGGTTCTCCCTCGAGAGACATGTACTGTACGGGACTCATGCTTGGGCAGAGAGGTCATTTGCTAACCTTCAATGTAGGGCTGAAGAGATCATCGACAACCCTCCAGAAATTAGTGATGATAATGATACAGCTTGCCAAGTATGTGGGTCCCGAGACAGAGGAGATGTAATGCTGATTTGTGGTGATGAAAATGGTTCCGTTGGTTGTGGAGTTGGCACCCATATCGATTGTTGCGATCCTCCTCTCGCAGAGGTTCCTGAGGTGGATTGGTTTTGTCCAAAATGCAGTAAAACCCGAAACTGCTCAAACTCTCCCAAGAAAAGGAAAAAAGTCGTTGACGATTATTGGTGGAAGTCTGAGGTTTCCATTTCCACTGTTGAAGGAAAGGTCTTTGAGGCTTTGGGTTTTGTTGTGCTTGAAGATGATTCCGACTTCTCGAAGCTCACTTTAAAGGAGGCTTTGGGACATGCCAAGGTTAAACCCGAAGGTCTGATGGCCCAATTGGACCATGGTTACACAATTGCTGGGCTGAACAAATTGGACAATACATCCAATTTCCTTTCAAAGTTCACTGTCTCTCCTTTACAGACTAAACCGTCTACCCTCGAAAGTCACTAG 3873 0.4232 MLETSYPSQMFLGIHFVLFGFDPITESKVRFKLVNGGGVDVGQYSPSCTHVIVDKVAHDDPVCVAARNDGKTLVTALWVDHSADIGMPVDATSVMYRPLKDLKGIPGAKNLIVCLTGYQRQDRDDIMTMVGLIGAQFSKPLVANKVTHLICYKFEGEKYELAKRLKTIKLVNHRWLEDCLKDWVLHPEDKYRKSGYELEMMAEEAKDSEEEAEDLKRGQSGGRNVSKSPFSAKLSTATTLKLPKLVREASTTFPDSNAPEALLNKGHDTLFIPENENRPNEARSFHQDDPKISFGDHSVSSHDASGQLPDLCAKTTKPGNTGVPKAADDQCTSEFAELVNDLKLTSDSVEALVHSDAKVSTTSDSKKNLKKIPPPRKLNEKSANVCGTSASPLNDLKFSINPETSSSKVEKASNRISFPCVEGSGKGSDWREPNNVLPQKRTIEASTKLKPKMTLDAKLSIERTPSPNGVNQGLKLTSLMDEQPEIEDHFSVGKGGMKNLETVSSESVQYDDAYQNSTQRYAQSLTEPKINGKPDIAGFGMGEVAQDGTETKPHDAKNDLECSYQSNKKCQNEESTGLTTLDLCNKVSDKLIKKSPRKKTVAKKCLGSRRKLGAIAKQKGLISLNESTPGGNTASRFNVCKETASSDDKKLHTSSKIVDAETSSELERVSKSAENAGGGEFQDDETEAQDEKCEYKAMAIDENNDEFVHLSKKADAQTQKSEAIQHIPKCEEAEPPIEGTNVTEQSVLEQVDSTSKVKEKQKGRKLAGRNKTTVGKDVMKSKEGVYGAKIDNGGKDKAEMETLEKMSLPHGRNDSSAAPAINSENFREVEKENRPIDGEKDTGEGISIRNSVIKASVNPAKMQKAKKSALKSSVSEDDKRVKREAACFIVSGHRLQRKEFQQIIKRLKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKTDYLTACNQAGKFLAEEPYEWHKSGLSEDGAINMEAPRRWRLLKERTGHGALYGMRIIIYGDCIAPPLDTLKRVLKAGDGTIVATCPPYTRFLDTRIDYAVVSPGMPRVDLWVQEFLKHEIPCVLADYLVEYVCKPGFSLERHVLYGTHAWAERSFANLQCRAEEIIDNPPEISDDNDTACQVCGSRDRGDVMLICGDENGSVGCGVGTHIDCCDPPLAEVPEVDWFCPKCSKTRNCSNSPKKRKKVVDDYWWKSEVSISTVEGKVFEALGFVVLEDDSDFSKLTLKEALGHAKVKPEGLMAQLDHGYTIAGLNKLDNTSNFLSKFTVSPLQTKPSTLESH 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1659 1290 ProSiteProfiles BRCT domain profile. 888 970 IPR001357 -
Bisa07g1659 1290 SMART PHD_3 1129 1181 IPR001965 -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 279 296 - -
Bisa07g1659 1290 Gene3D BRCT domain 1 95 IPR036420 -
Bisa07g1659 1290 SUPERFAMILY FYVE/PHD zinc finger 1121 1188 IPR011011 -
Bisa07g1659 1290 SUPERFAMILY BRCT domain 109 193 IPR036420 -
Bisa07g1659 1290 SMART BRCT_7 99 183 IPR001357 -
Bisa07g1659 1290 SMART BRCT_7 878 960 IPR001357 -
Bisa07g1659 1290 SMART BRCT_7 8 86 IPR001357 -
Bisa07g1659 1290 SMART BRCT_7 998 1085 IPR001357 -
Bisa07g1659 1290 SUPERFAMILY BRCT domain 888 990 IPR036420 -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 650 691 - -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 204 230 - -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 729 778 - -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 360 385 - -
Bisa07g1659 1290 FunFam DNA topoisomerase 2-binding protein 1 880 997 - -
Bisa07g1659 1290 Gene3D BRCT domain 880 996 IPR036420 -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 808 844 - -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 360 377 - -
Bisa07g1659 1290 Gene3D BRCT domain 998 1098 IPR036420 -
Bisa07g1659 1290 Coils Coil 198 218 - -
Bisa07g1659 1290 ProSiteProfiles Zinc finger PHD-type profile. 1127 1183 IPR019787 -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 825 844 - -
Bisa07g1659 1290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1117 1206 IPR013083 -
Bisa07g1659 1290 Gene3D BRCT domain 99 224 IPR036420 -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 650 668 - -
Bisa07g1659 1290 Pfam PHD-finger 1130 1182 IPR019787 -
Bisa07g1659 1290 MobiDBLite consensus disorder prediction 279 309 - -
Bisa07g1659 1290 Pfam BRCA1 C Terminus (BRCT) domain 890 956 IPR001357 -
Bisa07g1659 1290 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 715 1195 IPR044254 -
Bisa07g1659 1290 CDD BRCT_PAXIP1_rpt3 16 87 - -
Bisa07g1659 1290 Pfam twin BRCT domain 111 175 IPR001357 -
Bisa07g1659 1290 CDD BRCT_TopBP1_rpt7 887 960 - -
Bisa07g1659 1290 ProSiteProfiles BRCT domain profile. 109 193 IPR001357 -
Bisa07g1659 1290 SUPERFAMILY BRCT domain 7 92 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1659 Bisa-ChrBisa07 42375656 42383275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1659 129 282 Core DNA Replication Machinery Family AT4G02110 51.299 1.66e-37 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa07g1659 BRCT 1e-07 CL0459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1659 07 42375656 42383275 Bisa07g1659 07 42375656 42383275 ECH