LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g1632	ATGGATGGTTGGACTCGCAGTCCACTACCTCAAGATCCAATTGCGGCGTTGATATTTCTGCCTTCGGATCCGCCTTCACATGCTATTACTCCTGATTCATTGGAAAACATTCAACATTTTCTGCTGAAATGGTTGCTTGTATTATCTTCCTTGGTATTTATGGCTGATTCTAATGCATTTGATAAGACAATGATGCCTCCATCATTAACTCCAGCTAGACCGCCTTTGGCTGCTATAGTTGTTCGTGATCTTCCCTTACCAGCAAATGTCCATGGGCACAAGTATCTGGCACCCCATGGTGGACCAATTCCAACACTGTCACCATCCCATCCTCCTCTGTATGGTCCATCAATAAGTACTGGTATCCCCCCTGCAAGTTCACGTTCTAAGCCATTCATGAAGAGGAGTGAATTAGGGACTCAAATTTCTGGCTTTAGACATAATGGCCCTATGCATTCAACTGCTGGTGCAATTCCTTCGGGTTTGGCTCAGCCACCATTGTCCCCTTATGCTTCCAGTTGTTGTAAACAAGACATGGTATTGAAGAGAGGGAGTAACAGTTGCGACTGTGTGTATCCCATAAAACTAGACCTCCTGCTTTTGAATGTCTCTCAAAGCTCCAATTGGAATCTTTTTCTTGATGAATTAGCTACCCAACTTGGGCTGAAAACTCACCAGATTGAACTGATAAATTTCTATGTACTCAGCTTATCAACATTAAATATATCAATGGATATCACTCCAAAAAAAGGTATCAGTTTCTCCGCCGTCGAAGTGTCAAAAATAAACTTCTCGCTTTCAATGCATAAGATTCAAGTAGATGCTAGACTAGTAGGTGACTACAAACTTCTCAATATGACGTGGTATGAGCCTCCACCTCTGTCTCAGGCTCCTACTGTTGCCGCATCACCTATGAAAGCTCCTACTGACCAAACACCAGCAGCTACATCACTAAGTGGTTCAAATAGGGGAAGGCATTCGAATTTGTCTCCTATTATTGGAATTGGTGCTGGCATACTCTTCATTGCCATCATAACTGTACTTGTAATTTGTTTATGCACGTTGAGGCCAAAGACCAAAAGACCTCCAATAGATACTGAAAAGTCAAGGACAGAAGGTGCAGTTTCAGCTCCAGAGTCCTTTCCCCACCCAACCAGTACACGATTTATTTCTTATGAAGAACTCAAAGACGCAACAAACAACTTTGAAGCAGCAAGCATACTTGGAGAAGGCGGGTTTGGTAGAGTTTTTAAAGGTCTCTTAAAGGATGGTACAGCTGTAGCAATTAAGCGGCTCACTAGTGGAGGGCAACAGGGGGACAAAGAATTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAATTGGTGGGATACTATAGCAATCGTGACTCGTCACAAAATCTACTATGCTATGAGCTTGTCCCAAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGATACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCTTACTTGCATGAAGACTCACAGCCCTGCGTTATACACAGAGATTTTAAGGCATCTAACATATTGCTTGAAAACAACTTTCATGCTAAAGTTGCAGATTTTGGTCTAGCTAAACAGGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGTGTCATGGGCACGTTTGGGTATGTGGCTCCTGAGTATGCCATGACGGGTCACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTGGATATGTCACAGCCAGCTGGACAAGAGAACCTGGTTACGTGGGCAAGGCCAATCCTTCGAGATAAGAACCGGTTGGACGAGCTTGCTGATCCAAGACTGGGGGGAAATTACCCAAAGGAAGATTTCGTCCGTGTTTGTACTATTGCTGCAGCCTGTGTCGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTACAGCGCATGACAGAACATCAACATTCCATGTTAGCCTCCTCCAATACGCGGACTAACCTAAGACAATCCTCTACCACTTTCGAGTCTGATGGGACATCCTCTATGTTCTCTTCGGGTCCCTACTCTGGTCTAAGTGTCTTTGACAATGACAACATATCTAGGACAGCAGTCTTCTCTGAAGATCTTCATGAAGGACGATGA	2241	0.4418	MDGWTRSPLPQDPIAALIFLPSDPPSHAITPDSLENIQHFLLKWLLVLSSLVFMADSNAFDKTMMPPSLTPARPPLAAIVVRDLPLPANVHGHKYLAPHGGPIPTLSPSHPPLYGPSISTGIPPASSRSKPFMKRSELGTQISGFRHNGPMHSTAGAIPSGLAQPPLSPYASSCCKQDMVLKRGSNSCDCVYPIKLDLLLLNVSQSSNWNLFLDELATQLGLKTHQIELINFYVLSLSTLNISMDITPKKGISFSAVEVSKINFSLSMHKIQVDARLVGDYKLLNMTWYEPPPLSQAPTVAASPMKAPTDQTPAATSLSGSNRGRHSNLSPIIGIGAGILFIAIITVLVICLCTLRPKTKRPPIDTEKSRTEGAVSAPESFPHPTSTRFISYEELKDATNNFEAASILGEGGFGRVFKGLLKDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKNRLDELADPRLGGNYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMTEHQHSMLASSNTRTNLRQSSTTFESDGTSSMFSSGPYSGLSVFDNDNISRTAVFSEDLHEGR	746

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g1632	746	FunFam	Receptor-like serine/threonine-protein kinase ALE2	480	696	-	-
	Bisa07g1632	746	MobiDBLite	consensus disorder prediction	305	322	-	-
	Bisa07g1632	746	FunFam	Receptor-like serine/threonine-protein kinase ALE2	382	479	-	-
	Bisa07g1632	746	ProSiteProfiles	Protein kinase domain profile.	402	691	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa07g1632	746	MobiDBLite	consensus disorder prediction	361	382	-	-
	Bisa07g1632	746	Pfam	Protein tyrosine and serine/threonine kinase	405	677	IPR001245	GO:0004672\|GO:0006468
	Bisa07g1632	746	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	526	538	IPR008271	GO:0004672\|GO:0006468
	Bisa07g1632	746	PANTHER	OS01G0750732 PROTEIN	171	704	-	-
	Bisa07g1632	746	MobiDBLite	consensus disorder prediction	689	715	-	-
	Bisa07g1632	746	MobiDBLite	consensus disorder prediction	299	322	-	-
	Bisa07g1632	746	Gene3D	Transferase(Phosphotransferase) domain 1	480	704	-	-
	Bisa07g1632	746	CDD	STKc_IRAK	408	678	-	-
	Bisa07g1632	746	ProSitePatterns	Protein kinases ATP-binding region signature.	408	430	IPR017441	GO:0005524
	Bisa07g1632	746	Gene3D	Phosphorylase Kinase; domain 1	383	479	-	-
	Bisa07g1632	746	SUPERFAMILY	Protein kinase-like (PK-like)	377	679	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g1632	Bisa-ChrBisa07	41731758	41737765	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g1632	67	746	Receptor kinase-like Gene Family	AT4G02010	70.511	0.0	951

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Bisa07g1632		PK_Tyr_Ser-Thr	4.4e-44	CL0016