Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1602 ATGTGTCGGTTAGGCGCGAGTGGGGCGAAGCCTCTCCAGAATCCTAATCTATGGTGGGTAGAAGTGCACGTGTCCGTTATCCGAACAATTTTACCGGCAGCCACCGTTTTGATCACTGCGCGAACACGAATCCGAGCAGAAAGTGCGAGAAAAGTCTCAAGAAAGCTTAAGAACAAGGGACATCTCTTTGCTTTAACAGCATTCAGCTACGATAATCCTTCCTACCCCGTTCAACTGGTTGATTTTCGTTTGTCGTCTTTTCCTGAGAGAAGGAAGAATATAATTATGGTGGCCGAAGCAGACCTTGTTTGTCAACAGAGCGGCCCTGTGTTGGATGTACCTTATATTCCTAAAGGAACCAATATTCATGAGATCGGTGATGCAGCAGCCATGTCGCCTCCAAGTTTTGACCGAGTTCGTGCTTCTGAATTAGTATCTGCCGAGTTACTACTCAGTTCACAAGAAGATGATAGACTTGAAGACAGAATGTCAGATGCGGCTCTTGATTCTGCTGTTCTTCAATTTGTCCCCAACATCCGTTCTGGCAGTTTTGCTGACATTGGCCCCCGGAGATACATGGAAGATGAACATATAAGGATTGATGATTTGTCCTCTCACATGGGATCATTATATACGTTTCCTGAACCAAGTGCCTTCTATGGGGTATTTGATGGTCATGGAGGACCAGAAGCTGCAGCTTATATCCGAAAAAATGTCATGAGATTCTTTTTTGAAGATGTCTATTTTCCCCAGACATCTGAAGTTAATAATGTATTTTTGCAAGAGGCAGAGAACTCCCTCAGGAAGGCATTTCTTTTGGCTGACTCAAGTTTGGCTGATGATTGCAGTGTGAACAGTTCATCAGGAACCACGGCCCTTACTGCCTTTATATTTGGGAGGGTACTAATGGTGGCTAATGCTGGTGATTGCCGAGCAGTTCTCAGCCGTAAAGGAGAGGCAATCGACATGTCTCAAGACCACAGGCCTATTTATCCATCAGAGCGGAGGCGAGTTGAGGAATTGGGTGGTTACATAGATGACGGTTATCTTAATGGGGTTTTGTCAGTTTCTCGAGCTCTGGGGGACTGGGATATGAAGTTCCCTCGCGGTTCTTCCTCACCTTTGATTGCAGAACCTGAGTTTCGTCAAGTGGTTCTGACAGAGGATGATGAGTTCCTCATCATAGGTTGCGATGGTATTTGGGATGTGATGACAAGTCAGCATGCTGTGAGCCTTGTTCGTAGAAGCCTGAGGCGGCACGATGACCCGGAGCAATGTGCCAGAGACCTGGTCATGGAGGCATTACGCCTCAATACATTTGACAATCTTACAGTGATTGTTGTGTGTTTCTCTTCCACTGATCACAGGGAGCCATCCCCACCCTGCCAGAGGAAATTGAGGTGCTGTAGCCTCTCTGCAGAAGCTCTCTGTAGCTTGAGGAGCTTGCTGGAGGGGAGTGCAAGCAACTGA 1470 0.4687 MCRLGASGAKPLQNPNLWWVEVHVSVIRTILPAATVLITARTRIRAESARKVSRKLKNKGHLFALTAFSYDNPSYPVQLVDFRLSSFPERRKNIIMVAEADLVCQQSGPVLDVPYIPKGTNIHEIGDAAAMSPPSFDRVRASELVSAELLLSSQEDDRLEDRMSDAALDSAVLQFVPNIRSGSFADIGPRRYMEDEHIRIDDLSSHMGSLYTFPEPSAFYGVFDGHGGPEAAAYIRKNVMRFFFEDVYFPQTSEVNNVFLQEAENSLRKAFLLADSSLADDCSVNSSSGTTALTAFIFGRVLMVANAGDCRAVLSRKGEAIDMSQDHRPIYPSERRRVEELGGYIDDGYLNGVLSVSRALGDWDMKFPRGSSSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRRSLRRHDDPEQCARDLVMEALRLNTFDNLTVIVVCFSSTDHREPSPPCQRKLRCCSLSAEALCSLRSLLEGSASN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1602 489 Pfam Protein phosphatase 2C 190 442 IPR001932 -
Bisa07g1602 489 ProSitePatterns PPM-type phosphatase domain signature. 219 227 IPR000222 GO:0043169
Bisa07g1602 489 PANTHER PROTEIN PHOSPHATASE 2C 171 448 IPR015655 GO:0004722|GO:0006470
Bisa07g1602 489 SMART PP2C_SIG_2 195 450 IPR001932 -
Bisa07g1602 489 Gene3D - 169 457 IPR036457 -
Bisa07g1602 489 ProSiteProfiles PPM-type phosphatase domain profile. 180 450 IPR001932 -
Bisa07g1602 489 CDD PP2Cc 179 450 IPR001932 -
Bisa07g1602 489 FunFam Probable protein phosphatase 2C 22 164 453 - -
Bisa07g1602 489 SUPERFAMILY PP2C-like 174 451 IPR036457 -
Bisa07g1602 489 SMART PP2C_4 170 448 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1602 Bisa-ChrBisa07 41003279 41005855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1602 193 485 PP2C-type Phosphatase Gene Family AT3G62260 69.831 2.05e-150 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bisa07g1602 PP2C 7.1e-64 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1602 07 41003279 41005855 Bisa07g1602 07 41003279 41005855 ECH