Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1594 ATGGCTAATGACAACAGAAATCGTGGTCACCTCCTTCTTGGGTATGATATTAGTACCTCTAGCTTTTCATTGGACACGGATCCGCTCCAGTTAATTGAAGACAAGTCAAGAGGTCCGGCGCTTTATCCTACGCACTCCCCTCTCCTTATCCTGAGCAAATTTCACCGGTTTTGGAGCCGAGATCTTAATCTACGCCTTCAGACAGTTAGTTTCCTGCTCTTTGAGTTCTCAATTGCAGCATATTGCTATTTGATTTCAGGGATCATGAGTTGTTTCAGCTGTTGCGAAGAGGATGACCTCCACAAAGCTGCTGAGAGTGGAGGGCCGTACATGGTAAAAAATTCAGCAGGAAATGATGGAAATTATCATGCTTCTGAAACTGCAAAGCAGGGTGCTCAGGCTGTTAAAGTCCAGCCCATTGAAGTTCCTGCCATACTGGCAGATGAACTGAAAGAAGTTACAGATAATTTTGGGACAAATTCTCTGATTGGAGAAGGGTCCTATGGAAGAGTATATTATGGTGTTCTTAAAACTGGCCAGGCTGCAGCAATCAAGAAGCTAGATGCTAGTAAACAACCTGATGAGGAATTTCTAGCCCAGGTCTCCATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAGTTACTTGGTTATTGTGTTGATGGAAGTTCCCGTGTTCTTGCTTATGAGTTTGCATCAAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTCTATCATGGGCACAGAGGGTAAAAATTGCTGTAGGAGCTGCAAAAGGGCTTGAGTACTTGCATGAGAAGGCCGATCCTCACATTATCCACCGAGATATCAAGTCTAGCAATGTACTAATTTTTGATGATGATGTTGCTAAGATTGCTGATTTTGATTTGTCAAATCAAGCTCCAGACATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGCTTTGGCGTCGTCCTCCTGGAACTTCTGACTGGAAGGAAGCCTGTTGATCATACACTACCTCGTGGACAGCAGAGTCTGGTTACTTGGGCTACCCCAAAACTCAGTGAGGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGATTACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTAGCTGCTCTATGCGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCCCTTCAACCTTTGTTGAATGCACGACCTGGACCTGCTGGTGAAACACCAAATTAA 1350 0.44 MANDNRNRGHLLLGYDISTSSFSLDTDPLQLIEDKSRGPALYPTHSPLLILSKFHRFWSRDLNLRLQTVSFLLFEFSIAAYCYLISGIMSCFSCCEEDDLHKAAESGGPYMVKNSAGNDGNYHASETAKQGAQAVKVQPIEVPAILADELKEVTDNFGTNSLIGEGSYGRVYYGVLKTGQAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGSSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1594 449 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 92 441 - -
Bisa07g1594 449 SMART serkin_6 157 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1594 449 Gene3D Phosphorylase Kinase; domain 1 118 231 - -
Bisa07g1594 449 SUPERFAMILY Protein kinase-like (PK-like) 138 433 IPR011009 -
Bisa07g1594 449 CDD STKc_IRAK 163 436 - -
Bisa07g1594 449 FunFam pto-interacting protein 1 233 444 - -
Bisa07g1594 449 FunFam PTI1-like tyrosine-protein kinase 3 121 231 - -
Bisa07g1594 449 Gene3D Transferase(Phosphotransferase) domain 1 232 441 - -
Bisa07g1594 449 ProSiteProfiles Protein kinase domain profile. 157 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1594 449 ProSitePatterns Protein kinases ATP-binding region signature. 163 186 IPR017441 GO:0005524
Bisa07g1594 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Bisa07g1594 449 Pfam Protein tyrosine and serine/threonine kinase 161 433 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1594 Bisa-ChrBisa07 40780540 40785973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1594 72 434 Receptor kinase-like Gene Family AT4G02010 45.232 6.73e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bisa07g1594 PK_Tyr_Ser-Thr 3.3e-46 CL0016