Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1589 ATGGGGGATGGTTTTGATACACGGACAATCAGGAACATATGTATTTTGGCACATGTTGATCATGGCAAGACTACACTGGCTGATCACTTGATTGCTGCTTCTGGGGGTGGCTTACTTCACCCAAAGTTGGCTGGACGCATTAGATTTATGGATTATCTCGATGAGGAGCAAAGAAGGGCTATCACTATGAAGAGCTCCTCCATTGCTCTTCAATACAAGGAGTACTCTATTAACCTCATAGATTCCCCTGGTCATATGGACTTCTGTAGTGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCCTTGATTTTGGTTGATGCTGTGGAAGGTGTGCATATTCAAACCCATGCCGTGCTGCGGCAATGTTGGATTGAGAAGCTCTCACCATGCTTAGTTCTTAACAAGATTGATAGGCTAATTAGTGAGTTGAAGTTGAGTCCCATAGAAGCCTATACTCGGTTATTAAGGATTGTGCATGAGGTCAATGGGATAGTCAGTGCATACAAGTCTGAGAAGTATTTGTCAGATGTAGATTCCATACTTGCAGGACCATCAGGTGATGATATTGGTGATGAAAACAGTGACCTCAAAGAGGATGATGATGATGAAGATATGTTTCAACCACAGAAAGGGAATGTGGCATTTGTGTGTGCGCTAGATGGGTGGGGATTTGGAATTCATGAATTTGCTGAATTTTATGCTTCAAAACTTGGGGCTAGTGCTGCTGCATTGGAGAAGGCCTTGTGGGGTCCTCGGTACTTCAACCCGAAGACTAAAATGATTGTTGGTAAGAAAGGAATAGGAGCAGGGAGTAAGGCTAGGCCAATGTTTGTCCAGTTTGTTCTTGAACCACTATGGCAGGTATACCAGGGAGCTCTAGAGGCTGATGGGGAGAAAGGAATGCTTGAGAAAGTCATTAAATCATTTAATTTGTCTGTATCGTCTCGTGAACTGCAAAATAAAGACCCCAAAGTTGTGCTTCAAGCTGTTATGAGCCGGTGGCTTCCTCTGTCAGATACAATCTTATCAATGGTGGTTAAGTGTATGCCAAATCCAATATCAGCACAATCATTTCGCATCTCACGTCTTCTTCCAAAGAGAGAAGTTATTGATGATGGGGTTGATGAGAATGTGCTTGCAGAGGCAGAGCTTGTGAGAAAATCAGTAGAGGCATGTGATTTGAGACCTGAAGCTCCATGTGTTGCTTTCGTGTCAAAAATGTTTGCTGTCCCAGTTAAAATGCTTCCCCATAGGGGCTTACATGGGGAGATCATCAACTATTCTGGTGATGAAGGAGAGGGTGAGTCAGAAGAGTGTTTCTTGGCATTTGCTAGGATATTTAGTGGAGTTTTGTCAGTAGGACAGAGAGTTTTTGTGCTTTCAGCTTTGTATGATCCACTAAAAGGGGAACAAATGCAAAAGCACGTGCAGGAGGCTGAATTGCAATCCCTGTATTTAATGATGGGTCAGGGCTTGAAAGTAGTGACATCTGCAAGGGCTGGAAATATTGTTGCTATCCGTGGTCTCAGCCAACATATCCTGAAAAGTGCTACACTTTCATCCAGTAAGAATTGTTGGCCTTTCTCTAGTATGGCTTTCCAGGTTGCACCAACACTGAGAGTTGCAATTGAGCCATCTGACCCTGCAGATATGGGTGCATTATTGAAAGGCTTGAGGCTTCTGAATCGAGCAGACCCATTTGTTGAGGTCACTGTTTCTGCAAGAGGAGAGCATGTCCTAGCTGCAGCAGGTGAAGTTCATCTGGAAAGATGTGTAAAAGATTTAAAGGAGAGATTTGCGAAGGTTAGTTTGGAAGTCTCTCCACCTCTTGTCTCTTATAAAGAGACCATTGAAGGAGAAGTGTCCAACATGCTGGAGAATTTGAAAGCTCTTAGTAAGAGCTCAGATTATGTTGAAAAAACGACACCAAATGGGAGATGCGTTGTCCGTGTGCATGTAATGAAACTTCCATCCTCTCTGACAAAGGTGCTTGATGATAGTTCTGATGTACTTGGAGATGCCATTGGAATTAAATCAGGGAAGACTGTTAAAAGTTTGGATACCCAGAGATTAAGTATGCTTGGAAATGATAATCCAACCGAAGTGCTAAAAAAGCGCATAATGGATGCTGTGGAAAGTGAGGTCTTGAGTAAGAACAAGAATGAGGATTATGCTGACAAATGTAAGGCTAAGTGGTTAAAGCTTTTGAGGAGGATATGGGCACTTGGACCAAGGCAAATTGGTCCCAACATTCTCTTTACTCCTGATGTTAAAGTTGAGAGTACTGATAGCTCTGTTCTAATACATGGTCGCCCTTATGTATCTGAAAGGTTGGGTATTGCCGATGATTCAGTGGCTGAGATATTTTCCAATGTGAATGAAGCATTACACATGGAGGCTGAGCGTCTTGAGAGTAATGTCATCTCAGGGTTCCAACTGGCTACTGCAGCTGGACCATTATGTGATGAACCTATGTGGGGCATGGCATTTGTCATTGAGGCATATATTTCTCCCTATACAGGGCAGTATGACGAATCTGAAACTCACCAACAATCTGAGCAGTATGGTATTGTTGCAGGACAGGTAATTGCGACTGTCAAAGACGCTTGTAGAGCAGCTGTGCTCCAGAATAAGCCACGTCTTGTAGAAGCCATGTACTTTTGTGAATTGAATACCCCTACGGAATATTTGGGGCCCATGTATGCTGTACTTGCCAGAAGACGGGCCCGAGTTTTGAAGGAAGAGATGCAGGAAGGTTCTCCCTTCTTCACTGTGCATGCCTATGTGCCTGTCTCTGAAAGTTTTGGTTTTCCTGATGAGCTTAGGAGGTGGACTTCTGGGGCTGCAAATGCACTTCTTGTCTTTAGCCACTGGGAAGCACTTTCTGAGGATCCTTTCTTTGTGCCTAAAACAGAAGAGGAAATCGAGGAGTTTGGAGATGGCTCTAGTGTGCTTCCTAATACAGCAAGGAAGCTAATTAATGCAGTCAGACGGCGTAAAGGCCTTCAGGTGGAGGAAAAAGTGGTACAGCATGGATCAAAGCAGAGGACACTAGCTCGCAAAGTCTGA 3072 0.4382 MGDGFDTRTIRNICILAHVDHGKTTLADHLIAASGGGLLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALQYKEYSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPIEAYTRLLRIVHEVNGIVSAYKSEKYLSDVDSILAGPSGDDIGDENSDLKEDDDDEDMFQPQKGNVAFVCALDGWGFGIHEFAEFYASKLGASAAALEKALWGPRYFNPKTKMIVGKKGIGAGSKARPMFVQFVLEPLWQVYQGALEADGEKGMLEKVIKSFNLSVSSRELQNKDPKVVLQAVMSRWLPLSDTILSMVVKCMPNPISAQSFRISRLLPKREVIDDGVDENVLAEAELVRKSVEACDLRPEAPCVAFVSKMFAVPVKMLPHRGLHGEIINYSGDEGEGESEECFLAFARIFSGVLSVGQRVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSARAGNIVAIRGLSQHILKSATLSSSKNCWPFSSMAFQVAPTLRVAIEPSDPADMGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFAKVSLEVSPPLVSYKETIEGEVSNMLENLKALSKSSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDVLGDAIGIKSGKTVKSLDTQRLSMLGNDNPTEVLKKRIMDAVESEVLSKNKNEDYADKCKAKWLKLLRRIWALGPRQIGPNILFTPDVKVESTDSSVLIHGRPYVSERLGIADDSVAEIFSNVNEALHMEAERLESNVISGFQLATAAGPLCDEPMWGMAFVIEAYISPYTGQYDESETHQQSEQYGIVAGQVIATVKDACRAAVLQNKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPFFTVHAYVPVSESFGFPDELRRWTSGAANALLVFSHWEALSEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLQVEEKVVQHGSKQRTLARKV 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1589 1023 SMART EFG_C_a 881 970 IPR000640 -
Bisa07g1589 1023 FunFam Elongation factor like GTPase 1 227 336 - -
Bisa07g1589 1023 Pfam Elongation Factor G, domain III 538 605 IPR041095 -
Bisa07g1589 1023 CDD EF2_II 400 523 - -
Bisa07g1589 1023 SUPERFAMILY EF-G C-terminal domain-like 536 610 IPR035647 -
Bisa07g1589 1023 SUPERFAMILY Translation proteins 391 532 IPR009000 -
Bisa07g1589 1023 Gene3D - 880 1014 - -
Bisa07g1589 1023 MobiDBLite consensus disorder prediction 185 204 - -
Bisa07g1589 1023 Gene3D - 4 206 IPR027417 -
Bisa07g1589 1023 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 243 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 CDD EF2 11 235 - -
Bisa07g1589 1023 Pfam Elongation factor Tu domain 2 442 520 IPR004161 GO:0005525
Bisa07g1589 1023 Gene3D - 633 878 IPR014721 -
Bisa07g1589 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 351 IPR027417 -
Bisa07g1589 1023 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 Pfam Elongation factor G C-terminus 882 966 IPR000640 -
Bisa07g1589 1023 CDD EF2_snRNP_III 538 609 - -
Bisa07g1589 1023 Gene3D Elongation Factor G (Translational Gtpase), domain 3 537 613 - -
Bisa07g1589 1023 FunFam Elongation factor 2-like protein 2 215 - -
Bisa07g1589 1023 FunFam Elongation factor like GTPase 1 880 1015 - -
Bisa07g1589 1023 SUPERFAMILY EF-G C-terminal domain-like 884 982 IPR035647 -
Bisa07g1589 1023 FunFam Translation elongation factor 2 537 613 - -
Bisa07g1589 1023 NCBIfam small GTP-binding protein domain 10 140 IPR005225 GO:0005525
Bisa07g1589 1023 CDD aeEF2_snRNP_like_IV 609 888 - -
Bisa07g1589 1023 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 7 1022 - -
Bisa07g1589 1023 Pfam Elongation factor Tu GTP binding domain 9 351 IPR000795 GO:0003924|GO:0005525
Bisa07g1589 1023 CDD eEF2_snRNP_like_C 884 962 - -
Bisa07g1589 1023 Gene3D Yeast translation eEF2 (G' domain) 227 336 - -
Bisa07g1589 1023 Gene3D Translation factors 353 535 - -
Bisa07g1589 1023 FunFam Elongation factor Tu family protein 353 535 - -
Bisa07g1589 1023 SUPERFAMILY Ribosomal protein S5 domain 2-like 612 883 IPR020568 -
Bisa07g1589 1023 Coils Coil 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1589 Bisa-ChrBisa07 40433757 40436828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1589 3 1023 Eukaryotic Initiation Factors Gene Family AT3G22980 72.390 0.0 1514