LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g1580	ATGGATCATAACCAACTTCCTCCTCGTGAATTGACCTTCTTAAGCTCCCATGGCTTTCTCCGGCGGAATTTAGATCGAATAACCGAAGACCATGGCGAGCACCGAGATCCTCCAATCAAAGAAATGGATTTCTTCTCAGGTTCAGGTACTAAATCCAGAAATCATCACCCGCCTCAGGATCAAGATCGCGACCGCCAGCACAATTCTAACGGTGGAAATGGATCTTCAATTCTTTACAGTACTCATCTTTCCGTAAACACCGGACTAAATTTAACGAGTGCAAATTCTGGAATATTGTCAAGCTCAGCAAGTGATGGAAATCCTAATACCGAGCTGAGTACTGTCCGAGTCCGACGTGAATTGCAGATGCTCCATGAAGAGAATCAAACATTGAGAACTAAGCTAGATCAGATCACCAAAAGCTATAGCCAACTGCAAGCTCAGCTGTTTATCGCTTTGCAATTGCATAAACAAAACCCTCTGCAGCGAGCATGTCCCGAAGATGATTTTGACCGCTCCTCTCAGAGTTGGAGTTCGTCCAAGAGTCCCAACTTACATGAATCTAAGCCTAGGGATGAACAAGTAGCTGATCAGATTCCATTCAGGAAAGCCAGGGTTTCAGTACGTGCAAGATCAGAAGCTCCTTTGATAAGCGATGGATGTCAATGGAGAAAATATGGTCAAAAAATGGCAAAGGGTAGCCCTTGTCCTCGTGCTTATTATCGTTGCACTATGGCTGTAGGGTGCCCAGTCCGTAAGCAGGTGCAAAGGTGTGCGGAGGACAGGACAGTGCTGATAACAACTTACGAAGGCAACCACAACCACCCTCTCCCTCCTGCAGCCACTGCAATGGCCAGCACCACTTCGGCGGCGGCGGCGATGCTCCTATCAGGCTCAAGTTCAAGCACGAGCAAGGAATTAGGGTTTACAAACTCAGCAGGATACTTGTGTTCACTCCCCTTCGCATCAATGGCAACCCTATCAGCCTCCGCACCATTCCCCACCATCACCCTCGACTTGACCTGCAACCCCAACGCCATGCAACTACAACGTGCACCACCCTATCACTCTGGGCCCACATTCCCCTTGTTGTTTCCCCAGAACCTGAAGCTTCAACTAGGGCAAAGGCTGCAGCCTTCGTCGGCGACTATGGTTGAGACGGTGAGATCAGCCATCGCTTCTGATCCCAATTTCACTGCAGCACTTGCGGCTGCAATCTCATCCATCATAGGGGCATCCAGAGGCAGTGATGCTAATAATATTATTGGTAACAACAACACAGAGAGGTCCAAAGGGACTAAGGGACAAAGAGGTGGTGAGATAGACTGCTATGCCATTGATTCAAACAAGATCCGAGAGATGAGCAAAGCGCTGGAGGGATTGAAATAG	1389	0.4845	MDHNQLPPRELTFLSSHGFLRRNLDRITEDHGEHRDPPIKEMDFFSGSGTKSRNHHPPQDQDRDRQHNSNGGNGSSILYSTHLSVNTGLNLTSANSGILSSSASDGNPNTELSTVRVRRELQMLHEENQTLRTKLDQITKSYSQLQAQLFIALQLHKQNPLQRACPEDDFDRSSQSWSSSKSPNLHESKPRDEQVADQIPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGSPCPRAYYRCTMAVGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSSSSTSKELGFTNSAGYLCSLPFASMATLSASAPFPTITLDLTCNPNAMQLQRAPPYHSGPTFPLLFPQNLKLQLGQRLQPSSATMVETVRSAIASDPNFTAALAAAISSIIGASRGSDANNIIGNNNTERSKGTKGQRGGEIDCYAIDSNKIREMSKALEGLK	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g1580	462	SMART	WRKY_cls	217	277	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1580	462	Pfam	WRKY DNA -binding domain	219	276	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1580	462	SUPERFAMILY	WRKY DNA-binding domain	210	278	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1580	462	Gene3D	WRKY domain	202	279	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1580	462	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	107	419	IPR044810	GO:0003700
	Bisa07g1580	462	MobiDBLite	consensus disorder prediction	28	79	-	-
	Bisa07g1580	462	ProSiteProfiles	WRKY domain profile.	212	278	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g1580	462	MobiDBLite	consensus disorder prediction	163	195	-	-
	Bisa07g1580	462	Coils	Coil	121	148	-	-
	Bisa07g1580	462	FunFam	probable WRKY transcription factor 31	202	279	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g1580	Bisa-ChrBisa07	39776791	39780621	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g1580	9	407	WRKY Transcription Factor Family	AT4G01720	43.803	3.81e-84	265

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa07g1580		WRKY	3.7e-24	CL0274