Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1576 ATGTTGCAGAAGATGTGCGGTAAAGCAGGGAGGCAAGCTAGTCAGTCAGAGATGGTGGACTCAGGACAGGACAGGAGGTGTGAGAAGGGCAACAACATCCATCATCATCATGATTGTCTATCTTTTTTGGTGCGTGGTGTTGACGCGTTGTATCCTCGTTTTCCCAAAATCCAGCTCATCCTCATCCTGCGAAATTCAAAAGTTCGGTACGGGAATGACTATGTTGAGCTGGTATGGCAGAATGGCCAAATTCTAGTGCAAGGAGGGTCGTCCCCATGTGGAACACGAAAGAGACCCTCGTGCATTGGGTATTCCATAAACTCCTCCTCTGAAGCCAACGATGGACATCCTTGCATAACAAAAAGAGCAAGGTTCAACACTTTATACTCCCTCTTCGGTTCTAATTCCCATCAAAATCCCCAACATTCCCATCCCAGTGATTACAAATACATCACCAAGAGCAACAGTTTCTGCAACGGTAATAAGCTTGAAGCAAAAGAATCTAACTCCAGGCCCACTGGGGGGACCAGTCAATTAGGCTCATCTAATTCCTTGCAGAAGCATGAGTTGGGACCTGATCAACGAATGGAGAAGGAGAAGGTGAATTTCTCAAACTTCCTAAGACCTGCACTGTTTTTCAGATCTAGCTATCAGCTAAACAGTGCAACCCAACCCACAAACGGCGGCGTTTTGGCAAGAGTGGAGGAGGTCAAAAACAGCAGAAAAGCTCTGGAAAATTCAGGGTTGATTGACTCAGCTAAGAAGGGATCGCATGGTCTCATCATCGATGGAGTTCAACATCGTGAGGACCAAACAGTTTTGGATCGTCACGAAGCGAATGCCACACCTAATTCTGTTGCAAAAGGTGATCATGAGGGAATACCGCCTGACGAGCAGTCTGAAGCTATTAGACACAATAGTACTGCCATAATCAGAACACAGAAAGAAAAAAGAAAATCTTATGTTGATGAATTTTACAATGGACCCTTGATGGCGTCTTCTTCTTTGTGCTCGCTTGAAGCCTCAAGTGACCCTAGTTTTCGTAGCAGGAAGCAGGAGGACACCGAGGATTCAAACTTTACAAGTGATAATGATGAAGAAGCAGAAGATGTTACGAATACGAACGAAACCCCTCCTCGGGAGGGTTCAAGAGGCAAGAAAACGAGGAACCCAGCCATACACAATCTATCTGAGAGGAAGCGAAGAGACAAGATTAACAAGAAGATGCGTGCATTAAAAGAGCTTATACCTAATTGCAATAAGATGGACAAGGCTTCCATGCTTGACGATGCCATCGAATACCTCAAGACCCTTCAGCTTCAGTTACAGGTTATGTCAATGGGAAGTGGGCTGTGTAGTATGCCTATAATGATGATGGGAGGTGGAATGAACATAAGGCCTGGAGGCCTGGGCATACCTTGCAGCCTCCCTCCTCAGTTCCCTAACATTCCACAAATGGCTCCACACATCACTGACAACAGACTTCAGATGCTTCCTTTCCCAAATCAAATCCCACCCATGCAATTCCCAATGTCTCATCCTCCTCCTTTCATTCCTTTGCCTCCTAAGCATCTCTCTACTCTCAATGATTCTCTACCCAACAACTCTGATCTTAATGCTCAGCTTCTGTGA 1632 0.4559 MLQKMCGKAGRQASQSEMVDSGQDRRCEKGNNIHHHHDCLSFLVRGVDALYPRFPKIQLILILRNSKVRYGNDYVELVWQNGQILVQGGSSPCGTRKRPSCIGYSINSSSEANDGHPCITKRARFNTLYSLFGSNSHQNPQHSHPSDYKYITKSNSFCNGNKLEAKESNSRPTGGTSQLGSSNSLQKHELGPDQRMEKEKVNFSNFLRPALFFRSSYQLNSATQPTNGGVLARVEEVKNSRKALENSGLIDSAKKGSHGLIIDGVQHREDQTVLDRHEANATPNSVAKGDHEGIPPDEQSEAIRHNSTAIIRTQKEKRKSYVDEFYNGPLMASSSLCSLEASSDPSFRSRKQEDTEDSNFTSDNDEEAEDVTNTNETPPREGSRGKKTRNPAIHNLSERKRRDKINKKMRALKELIPNCNKMDKASMLDDAIEYLKTLQLQLQVMSMGSGLCSMPIMMMGGGMNIRPGGLGIPCSLPPQFPNIPQMAPHITDNRLQMLPFPNQIPPMQFPMSHPPPFIPLPPKHLSTLNDSLPNNSDLNAQLL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1576 543 MobiDBLite consensus disorder prediction 161 189 - -
Bisa07g1576 543 MobiDBLite consensus disorder prediction 380 402 - -
Bisa07g1576 543 MobiDBLite consensus disorder prediction 515 543 - -
Bisa07g1576 543 MobiDBLite consensus disorder prediction 161 197 - -
Bisa07g1576 543 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 386 458 IPR036638 GO:0046983
Bisa07g1576 543 Gene3D - 385 447 IPR036638 GO:0046983
Bisa07g1576 543 MobiDBLite consensus disorder prediction 340 403 - -
Bisa07g1576 543 MobiDBLite consensus disorder prediction 527 543 - -
Bisa07g1576 543 FunFam Basic helix-loop-helix transcription factor 384 447 - -
Bisa07g1576 543 SMART finulus 395 444 IPR011598 GO:0046983
Bisa07g1576 543 MobiDBLite consensus disorder prediction 1 26 - -
Bisa07g1576 543 CDD bHLH_AtPIF_like 389 451 IPR047265 -
Bisa07g1576 543 PANTHER TRANSCRIPTION FACTOR PIF3 66 143 IPR044273 GO:0003700|GO:0006355
Bisa07g1576 543 Pfam Helix-loop-helix DNA-binding domain 394 439 IPR011598 GO:0046983
Bisa07g1576 543 MobiDBLite consensus disorder prediction 282 317 - -
Bisa07g1576 543 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 389 438 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1576 Bisa-ChrBisa07 39647731 39651631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1576 201 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 36.531 6.03e-32 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1576 HLH 3.3e-13 No_clan