Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1573 ATGGTTCTCGCAATCTCGCCTTCTTGTCTCGATTCTCCGACGTTCTCCCATCTCTCTTCCTTTCAAAGTCTCATGCTCGCAATCTCGCCTTCATTGCACAAGTCTTCCAGCACTGGCAAAAGTGCCTTCATATTCATATATATCACCGATCTCTATCTCTTTCGTCCTCATTCACTTTCTAATTCTATCACAGCGCCTCCGCCTAAGTCCTACCTCTCCTCATATACATCTGTCCCAGATTTCTTCCAACTTCCCTCGCTACAAATGGGGAGGCACTCTTGCTGTTACAAGCAGAAGCTTCGCAAGGGCCTATGGTCGCCTGAGGAGGACGAAAAGCTTTTGAGACACATCACTAAGTATGGCCATGGCTGTTGGAGCTCTGTTCCTAAGCAAGCAGGTCTGCAGAGGTGTGGTAAGAGCTGTAGGCTGAGGTGGATCAATTACTTGAGGCCTGATTTGAAGAGAGGCACATTCTCACAAGAAGAAGAAAACCTCATCATTGAACTTCATGCAATATTGGGAAACAGATGGTCTCAAATTGCGGCTCAATTGCCCGGGAGGACTGACAATGAAATAAAGAATCTGTGGAATTCATGCTTAAAGAAGAAACTGAGGCAAAGAGGCATAGACCCTGTCACGCACAAACCGCTCTCTGAGGCTCAAAATGGAGACGACAAAGACGCAGCATCAAAGAGCAGAGAGAAAGCAGCCTCAGTGTCCAGTGAATTGAACCTCCTCAAATCAGAAAGCCCCAGTTCAGATGCCCCAATTCATATGGAGGGTTCTTCAAGCTTCAAGTTCAATAGCAACGCCACCTTGATATCCGATTGTTCAAGCAAAGAACTAGCCCCACACAGGTTCATGACCAGCTACACCACTTCAGATTTGATGGGGAATTTGAATTTCCCACTTCAGATGACTTACGCTTCCACCCATGATACCCTCACCTCTAATTCCAACTCTTCTCATTGGTTCACCCAAACAGGAAAATCAGTATTTGATATGAGCTCTGATTTCACTTCCAACGCAATCTCTTCTGTTCTTCCACCTACAGTCTTCTCATATCTCCCTGCGGTTTCTGCTCCCTGCGATGATATCTCCACCGCCTCTTTCTGGGAAGCCACTACCTCCAACACCAGAAGTAATAGCAGTAACACACCCTTAAACAGCGCACAGAACGGCGTCGTTTCTTGGGGATTCTCAGACTGTATTGCCTCTGCAAGAGACAACACACAAACCCAAGTGATGGAGGAAGCCAAGTGGGGTGACTGTGAGTACGTTCAAAACCCAATCTTAATGCTGACGGCTGTACAATATCAGACTCCTGAATCTCTATACAGTGATACTTTAGGGGCCATACCCATATTGCCGTATAACAACAAGCAGCAACAAGAACAACAATCGTCACAGAGTTGTAATATATTTTCCAAGGACATCCAGAAGCTCACCGCAGCATTTGGACATATATAG 1470 0.4605 MVLAISPSCLDSPTFSHLSSFQSLMLAISPSLHKSSSTGKSAFIFIYITDLYLFRPHSLSNSITAPPPKSYLSSYTSVPDFFQLPSLQMGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAILGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEAQNGDDKDAASKSREKAASVSSELNLLKSESPSSDAPIHMEGSSSFKFNSNATLISDCSSKELAPHRFMTSYTTSDLMGNLNFPLQMTYASTHDTLTSNSNSSHWFTQTGKSVFDMSSDFTSNAISSVLPPTVFSYLPAVSAPCDDISTASFWEATTSNTRSNSSNTPLNSAQNGVVSWGFSDCIASARDNTQTQVMEEAKWGDCEYVQNPILMLTAVQYQTPESLYSDTLGAIPILPYNNKQQQEQQSSQSCNIFSKDIQKLTAAFGHI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1573 489 Gene3D - 157 234 - -
Bisa07g1573 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 149 IPR017930 -
Bisa07g1573 489 FunFam Myb transcription factor 99 155 - -
Bisa07g1573 489 CDD SANT 157 197 IPR001005 -
Bisa07g1573 489 MobiDBLite consensus disorder prediction 210 259 - -
Bisa07g1573 489 CDD SANT 105 149 IPR001005 -
Bisa07g1573 489 PANTHER MYB DOMAIN PROTEIN 55 89 412 - -
Bisa07g1573 489 FunFam MYB transcription factor 156 228 - -
Bisa07g1573 489 Gene3D - 99 155 - -
Bisa07g1573 489 MobiDBLite consensus disorder prediction 234 259 - -
Bisa07g1573 489 SUPERFAMILY Homeodomain-like 100 196 IPR009057 -
Bisa07g1573 489 Pfam Myb-like DNA-binding domain 155 199 IPR001005 -
Bisa07g1573 489 Pfam Myb-like DNA-binding domain 102 149 IPR001005 -
Bisa07g1573 489 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Bisa07g1573 489 SMART sant 101 151 IPR001005 -
Bisa07g1573 489 SMART sant 154 202 IPR001005 -
Bisa07g1573 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 150 204 IPR017930 -
Bisa07g1573 489 ProSiteProfiles Myb-like domain profile. 150 200 IPR001005 -
Bisa07g1573 489 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1573 Bisa-ChrBisa07 39532629 39536859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1573 89 226 MYB Transcription Factor Family AT4G01680 92.086 9.16e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g1573 Myb_DNA-binding 2.4e-14 CL0123