Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1551 ATGAAAGCAGGAGAAGCCGGGTCGTCTCATGCGTTTTCGGGTCAAGGGATGAGCAACCGAGTTGGACACGTGGCGATCGAATACTTGGTGGTTCTAAGAAATTTAAGGGACCATAAGTTGAGCAGTGACCGAGGCTTCTGTTGCCGAGAGAAAATGGCTTCCATAATAGGTGTTTCGTCTATATACAATACTCCGTCTCTGGAGCTACTTAAAAGAGCAACCACGGTGACCGGTGCTACCACCTCGGTTTCGTTGCAATTGTCGGACAACAAGTCCCACTTTAACAACGTTCTGAGAGCTCACCTCAGTAATAATGGTAGTGGCACCTTCAAGAGCGGGTTTAAACCCGGAGTTAGATTTGTTCCTTCGGCCATCGCCTCGCCCAATTCTTCCGTTCTAAGCGAAGGAGCATTCAAGGGTATAGGTCGTGGATTGTCCGACAAAGACCCTTTGGATGATGTTATTGAAAGCGAGGACTACGACGATGATTCTGAAACGGAGGCTTTTTCAGGTGCTGAGAATGAGGACGAGCTCGACATTTCCAAGCTAGACTTGCCTTCGCGACTTGTGGATTCACTCCGGGCACGCGGGATTACTCATCTTTTCCCCATTCAGAGAGCTGTTATGCAACCTGCTCTCGAAGGTCGAGATCTTATTGCTCGAGCAAAGACTGGGACTGGGAAGACATTAGCATTTGGGATTCCAATTATTAAGGGCCTCTCTGACGATGCCTCTCAGAGGCGATCTGGTCGTCTTCCCAAAGTATTGGTCCTTGCACCTACCAGGGAATTAGCAAAGCAAGTGGAGAAAGAGATAAAAGAATCTGCACCCTATTTGAACACAGTTTGTGTTTACGGGGGTGTTTCTTACGTTACACAGCAAAATGCACTTTCCCGTGGTGTTGATGTAGTGGTTGGAACACCTGGTAGGATAATTGACCTAATAAATGGGAGCAGTCTTAAACTGAATGAAGTTAAGTACTTGGTCCTTGACGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATCTTAGAAAAGCTACCATCTGAGCGACAGAGCATGCTTTTTTCTGCAACCATGCCTAGTTGGGTGAAGAAACTTGCAAGAAAATATTTGGAAAATCCATTGACAATTGATTTGGTTGGTGAAGAAGAAGAAAAGCTTGCAGAAGGGATCAAACTTCATGCTATATCAGCCACTCCCACTTCAAAGAGGACAATGCTTTCTGATCTTATAACAGTTTATGCAAAGGGTGGGAAGACTATTGTTTTTACCCAGACAAAAAGAGATGCTGATGAAGTATCATTGGCATTAACAAATAGTATTCCTTCTGAGGCACTGCATGGTGATATATCACAGCATCAGAGAGAGAGAACATTGAATGGTTTTCGACAAGGGAAATTCACAGTGCTTGTTGCTACTGATGTAGCAGCCCGTGGACTTGACATTCCTAATGTTGATTTGATTATCCACTATGAACTTCCCAATGACCCTGAGACTTTTGTACATCGCTCTGGTCGTACTGGGCGTGCGGGAAAGGAAGGTACTGCCATTCTGATGTACACTAGTAGCCAGAGGAGAACAGTTAGGTCTCTTGAGCGTGATGTAGGATGTAAATTTGAATTTATTACTCCACCAGCTATGGAAGAGGTTTTGCAGGCATCTGCTGAGCAAGTGGTAGCCATACTTAAAGGAGTTCATCCTGAATCGGTTGAATTTTTCACCCCAACCGCACAAAAACTGGTTGAAGAGCAAGGAACAAGTGCCCTTGCCGCTGCCCTAGCACAACTAAGCGGGTTTTCTAAACCTCCTTCCTCCAGGTCCCTTATCAACCATGAGCAGGGATGGGTTACATTGCAATTGACTCGAGATCCAGAAAATTCTAGAAGATTTTTGTCTGCAAGATCGGTCACTGGGTTTCTTTCCGATGTTTATTTTCCAGCTGCTGATGAAGTTGGAAAAATACATATAATTGCAGATGAAAGGATTCAAGGAGCCGTTTTTGATATTCCAGAGGAGATTGCTAGGGAGTTACTGAATAAGGAATTACCACCTGGAAACACTATTTCTAAGATCACTAAGTTGCCTCCTTTGCAAGATGACGGGCCTCCTAGTGATTTCTATGGGAAGTTTTCTGATAGAGATCAAAGTAACCGTAGGGGTTCCAGGGATCGGAGAGGAGGTTTTAAACCCTCGCGGGGGAGGGACTCTGATGATGAATTTGGCAATTCATATAGGAGAGGTGGTCGAAGTTTTAGAACTGGTAGAAGCAGTGGGGACTTTGACAACTTTGGTGATTCAAATAAGAGAGGTGGTCGAAGCTTTAGAAGTGGCAACAGCTGGTCGCAAAAGCCAAGAAGCAGCGAGGATGATTGGCTAATTGGAGGTAGAAGATCAAGCAGGTTTTCATCATCAGACAGAAGCTTTGGAGGGTCCTGTTTTAATTGTGGGCAATCTGGACATCGGGCATCTGAATGTCCCAACAAACTAGGCTTCTGA 2514 0.4503 MKAGEAGSSHAFSGQGMSNRVGHVAIEYLVVLRNLRDHKLSSDRGFCCREKMASIIGVSSIYNTPSLELLKRATTVTGATTSVSLQLSDNKSHFNNVLRAHLSNNGSGTFKSGFKPGVRFVPSAIASPNSSVLSEGAFKGIGRGLSDKDPLDDVIESEDYDDDSETEAFSGAENEDELDISKLDLPSRLVDSLRARGITHLFPIQRAVMQPALEGRDLIARAKTGTGKTLAFGIPIIKGLSDDASQRRSGRLPKVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGSSLKLNEVKYLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPSWVKKLARKYLENPLTIDLVGEEEEKLAEGIKLHAISATPTSKRTMLSDLITVYAKGGKTIVFTQTKRDADEVSLALTNSIPSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMYTSSQRRTVRSLERDVGCKFEFITPPAMEEVLQASAEQVVAILKGVHPESVEFFTPTAQKLVEEQGTSALAAALAQLSGFSKPPSSRSLINHEQGWVTLQLTRDPENSRRFLSARSVTGFLSDVYFPAADEVGKIHIIADERIQGAVFDIPEEIARELLNKELPPGNTISKITKLPPLQDDGPPSDFYGKFSDRDQSNRRGSRDRRGGFKPSRGRDSDDEFGNSYRRGGRSFRTGRSSGDFDNFGDSNKRGGRSFRSGNSWSQKPRSSEDDWLIGGRRSSRFSSSDRSFGGSCFNCGQSGHRASECPNKLGF 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1551 837 MobiDBLite consensus disorder prediction 761 792 - -
Bisa07g1551 837 SMART ultradead3 197 400 IPR014001 -
Bisa07g1551 837 Gene3D - 401 596 IPR027417 -
Bisa07g1551 837 Gene3D - 179 387 IPR027417 -
Bisa07g1551 837 SMART c2hcfinal6 817 833 IPR001878 GO:0003676|GO:0008270
Bisa07g1551 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 538 IPR027417 -
Bisa07g1551 837 Gene3D - 808 836 - -
Bisa07g1551 837 MobiDBLite consensus disorder prediction 690 815 - -
Bisa07g1551 837 CDD GUCT_Hera 611 691 - -
Bisa07g1551 837 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 209 383 IPR014001 -
Bisa07g1551 837 SUPERFAMILY Retrovirus zinc finger-like domains 806 835 IPR036875 GO:0003676|GO:0008270
Bisa07g1551 837 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 161 753 - -
Bisa07g1551 837 Pfam GUCT (NUC152) domain 604 704 IPR012562 GO:0003723|GO:0004386|GO:0005524
Bisa07g1551 837 SMART helicmild6 437 517 IPR001650 -
Bisa07g1551 837 FunFam ATP-dependent RNA helicase RhlE 170 386 - -
Bisa07g1551 837 Pfam Zinc knuckle 817 833 IPR001878 GO:0003676|GO:0008270
Bisa07g1551 837 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 412 557 IPR001650 -
Bisa07g1551 837 FunFam Nucleolar RNA helicase II 405 595 - -
Bisa07g1551 837 Pfam Helicase conserved C-terminal domain 410 517 IPR001650 -
Bisa07g1551 837 CDD SF2_C_DEAD 397 526 - -
Bisa07g1551 837 Pfam DEAD/DEAH box helicase 202 372 IPR011545 GO:0003676|GO:0005524
Bisa07g1551 837 CDD DEADc 189 384 - -
Bisa07g1551 837 ProSiteProfiles Zinc finger CCHC-type profile. 818 833 IPR001878 GO:0003676|GO:0008270
Bisa07g1551 837 MobiDBLite consensus disorder prediction 717 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1551 Bisa-ChrBisa07 39169490 39177021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1551 163 539 Eukaryotic Initiation Factors Gene Family AT1G72730 36.962 2.07e-64 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1551 07 39169490 39177021 Bisa07g1551 07 39169490 39177021 ECH