Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1545 ATGGGTATCAAGGGTTTAACAAAGCTTTTAGCGGATAATGCCCCAAAAGCCATGAAGGAGCGTAACTTCCAGAGTTATTCCGGCCGCAAGATTGCCATTGACGCCAGTATGAGCATTTACCAGTTCCTTGTCCGTACTCTTCATTTTGCTCCATCTCATTACTGTTACGCTTGCTTATGTTCATGGAATGCGGAAAAGCTCTTGATGAATGCCGTCTTTGATTTTGTGCAGATGGTCGTAGGAAGAAGTGGGACCGAGTTGCTCACCAATGAGGCTGGTGAAGTTACCAGTCATTTGCAAGGCATGTTTACACGGACAATCAGACTTCTAGAAGCTGGAATGGAGCCAGTATATGTTTTTGATGGGACGCCTCCTGATTTGAAGAAACAAGTGCTGGCTAAACGTTTCTCCCAGAAGGCTGATGCTAGCGAGGATTTGTCAGAAGCCATGAAGACTGGCAATATGGAAGACATCGAGAAATTTAGCAAACGGACAGTTAAGGTGACCAAGCAGCACAATGAAGGCTGCAAAAGACTTTTATCTCTCATGGGAGTGCCTGTCATTCAGGTGACAATACGCTACTCCAGAATTGTAACGTCAATCTTTGGTACTTATTTATCACATTGCAAAAGATTTGGTTTCCACAGGCACCGTCAGAAGCTGAAGCACAGTGTGCTGCACTTTGCAAATCTGGAAAGGCACGTTTATGCGGTGTGTTCTGAAGACATGGATACATTAACATTTGGAGCTCCTAGATTTCTTCGCCATTTAATGGATCCTACCTGGAAGAAAGTTCCAGTAATGGAATTCGAAGTTGCAAAGATATTGGAGGAGCTAAATTTGACTATGGATCAATTTATTGACTTATGCATCCTTTCTGGGTGTGACTATTGTGAAAGCATTCGAGGGATTGGTGGAAAGACTGCTTTGAAGCTCATTCAACAGCATGGATCTATGGAGAATATACTGGAGAACATAAACAAAAAGAGGTACCAGATACCAGATGATTGGCCATATCAGGAGGCTAGGCAGATTTTTAAAGTACCGGTAGTCTTAACTGAAGAAGAGCAACTTGATCTTAAGTGGACTGCTCCAGATGAAGAAGGATTAATTACATTTCTGGTAAATGAGAATGGATTCAACAGTGATAGGGTGACAAAGGCGATGGGAAAAATTAAAGCTGCTAAGAACAAGCCATCACAAGGCCAGAAACAGAATGCAAGCTCAGATCTTTCAAATCAGCAACTGAGCATAAGATCTTATACCTGCAACTTTCTAACTGGTCTAGGCACATGGTCGTTGGCAACTTGGGCTTGCCCATTTATAATATGGGTTCCAAGCTATCAGCCATTATCTAGAGGTGTCGGCTTCGGTACTTGGAGCTGA 1386 0.4293 MGIKGLTKLLADNAPKAMKERNFQSYSGRKIAIDASMSIYQFLVRTLHFAPSHYCYACLCSWNAEKLLMNAVFDFVQMVVGRSGTELLTNEAGEVTSHLQGMFTRTIRLLEAGMEPVYVFDGTPPDLKKQVLAKRFSQKADASEDLSEAMKTGNMEDIEKFSKRTVKVTKQHNEGCKRLLSLMGVPVIQVTIRYSRIVTSIFGTYLSHCKRFGFHRHRQKLKHSVLHFANLERHVYAVCSEDMDTLTFGAPRFLRHLMDPTWKKVPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCESIRGIGGKTALKLIQQHGSMENILENINKKRYQIPDDWPYQEARQIFKVPVVLTEEEQLDLKWTAPDEEGLITFLVNENGFNSDRVTKAMGKIKAAKNKPSQGQKQNASSDLSNQQLSIRSYTCNFLTGLGTWSLATWACPFIIWVPSYQPLSRGVGFGTWS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1545 461 Pfam XPG I-region 232 296 IPR006086 GO:0004518
Bisa07g1545 461 Gene3D - 2 280 - -
Bisa07g1545 461 SUPERFAMILY PIN domain-like 232 296 IPR029060 -
Bisa07g1545 461 CDD PIN_FEN1 4 394 - -
Bisa07g1545 461 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 286 301 IPR006084 -
Bisa07g1545 461 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 28 42 IPR006084 -
Bisa07g1545 461 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 116 135 IPR006084 -
Bisa07g1545 461 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 229 249 IPR006084 -
Bisa07g1545 461 FunFam Flap endonuclease 1 281 348 - -
Bisa07g1545 461 SUPERFAMILY PIN domain-like 2 190 IPR029060 -
Bisa07g1545 461 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 230 408 IPR006084 -
Bisa07g1545 461 Hamap Flap endonuclease 1 [fen]. 1 410 IPR023426 GO:0016788
Bisa07g1545 461 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 281 411 IPR036279 -
Bisa07g1545 461 Gene3D - 281 347 - -
Bisa07g1545 461 SMART xpgineu 227 281 IPR006086 GO:0004518
Bisa07g1545 461 SMART HhH_4 283 316 IPR008918 GO:0003677|GO:0003824
Bisa07g1545 461 Pfam XPG N-terminal domain 1 45 IPR006085 GO:0004518
Bisa07g1545 461 Pfam XPG N-terminal domain 90 141 IPR006085 GO:0004518
Bisa07g1545 461 SMART xpgn3 1 142 IPR006085 GO:0004518
Bisa07g1545 461 MobiDBLite consensus disorder prediction 391 411 - -
Bisa07g1545 461 CDD H3TH_FEN1-Euk 284 352 - -
Bisa07g1545 461 FunFam Flap endonuclease 1 68 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1545 Bisa-ChrBisa07 39080961 39085832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1545 1 416 Core DNA Replication Machinery Family AT5G26680 62.019 0.0 521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1545 07 39080961 39085832 Bisa07g1545 07 39080961 39085832 ECH