Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1542 ATGGGAAGGCACTCTTGCTGCTACAAGCAGAAGCTAAGGAAAGGCCTGTGGTCTCCTGAGGAAGACGAGAAGCTTCTCAATTATATCACCCAGCATGGCCATGGATGTTGGAGCTCTGTCCCCAAACTTGCTGGCTTGCAGCGATGTGGCAAGAGTTGCAGATTGAGGTGGATAAACTATCTCAGGCCTGATTTGAAGAGAGGGGCATTCTCACTGCAGGAAGAGAATCTCATAATTGAACTCCATGCAGTATTAGGCAACAGGTGGTCTCAGATTGCAGCTCAGTTACCAGGAAGAACCGACAATGAGATTAAGAATCTGTGGAATTCGAGCCTCAAAAAGAAGCTAAGGCAAAGAGGCATTGACCCAAACACCCACAAGCCCCTCTCTGAGACTGACAAGCCTTCCTCAGCCGACACAACCAACGAACCCGGTCTGCCTCATTCAAAAAAACCGAACCCAACAGCCTCAGCGCCTGCACAGCCATACCCACTTGAACCGTCTCCCACATCCAATATCAGCAACAGCAATAATTCCCAGGATTTGTTTCTAGATAGGTCTCCTTCTGATATGATGGGTTACTTCTCTTTCTCCCACTTCAACTATGCACCAAATAACACCACATCCACCAGTACTGCTTCTCTTTGCTTCATTCCCAGCTCCACCACTCCTCCCTCTCAGCCTCAGGTCATGTCAGATTCAGACCTTAATTCTGCCATGCTCCATTCTGTGTCAACCTCAATTTTGCCCAATCCCCCCATGTCCTCTGCCCATATCCCATCACAAAACAACGCTACTTTCCTCGACAACACCGCTTTAACATGGGGCAAACACACCCATATGGTACCATTACTGGCAGAACAAGAAGACATAAAATGGTCTGAGTATCTAAACACCCCCTTCTTTCTGGGGAATCAAACCTCTCAATCTATCTACAGCGAGGTTAAACCAGAGACGGGGTTCATGGCAGATGAGTCAACGAGTGCTAGTTGGGACCAGCACCATAGCCAGCAGCAGCATCCTCAAGTTTTTCAAGCTTCAGATTTATATACCAAGGATCTGCAGAGATTCTCAGTGGCTTTTGGGCAAACACTTTAG 1098 0.4772 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITQHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSSLKKKLRQRGIDPNTHKPLSETDKPSSADTTNEPGLPHSKKPNPTASAPAQPYPLEPSPTSNISNSNNSQDLFLDRSPSDMMGYFSFSHFNYAPNNTTSTSTASLCFIPSSTTPPSQPQVMSDSDLNSAMLHSVSTSILPNPPMSSAHIPSQNNATFLDNTALTWGKHTHMVPLLAEQEDIKWSEYLNTPFFLGNQTSQSIYSEVKPETGFMADESTSASWDQHHSQQQHPQVFQASDLYTKDLQRFSVAFGQTL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1542 365 MobiDBLite consensus disorder prediction 134 148 - -
Bisa07g1542 365 CDD SANT 69 112 IPR001005 -
Bisa07g1542 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa07g1542 365 SMART sant 66 114 IPR001005 -
Bisa07g1542 365 SMART sant 13 63 IPR001005 -
Bisa07g1542 365 Gene3D - 11 67 - -
Bisa07g1542 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa07g1542 365 CDD SANT 17 61 IPR001005 -
Bisa07g1542 365 MobiDBLite consensus disorder prediction 115 185 - -
Bisa07g1542 365 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bisa07g1542 365 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa07g1542 365 MobiDBLite consensus disorder prediction 115 133 - -
Bisa07g1542 365 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa07g1542 365 MobiDBLite consensus disorder prediction 167 185 - -
Bisa07g1542 365 FunFam MYB transcription factor 68 140 - -
Bisa07g1542 365 FunFam Myb transcription factor 11 67 - -
Bisa07g1542 365 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bisa07g1542 365 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa07g1542 365 Gene3D - 69 142 - -
Bisa07g1542 365 PANTHER MYB DOMAIN PROTEIN 55 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1542 Bisa-ChrBisa07 39030176 39031542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1542 1 365 MYB Transcription Factor Family AT1G09540 51.145 1.61e-115 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g1542 Myb_DNA-binding 4.1e-15 CL0123