Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1534 ATGGCCCAGATTGCAACGAGGACGAGATCCTATCACTGCTCCTCAGCGAGAACCTTGCTGCTTATCTATATCGAGACCTGGGTAGATACAAAAATGGAATATCGGTGGACCAAGGGTAGGCAGGAAACTGTTGCCCGTGACAGGAGGCAATTTGGAAAGGAGCAGACATATCAAGACTCCCTTATTGAGGATATCTCGGAGGATTTCCGATTGCCAATCAACCAAAGGCCAACTGAAAATGTTGATCTGGATAATGTGGAACAAGCATCCCTTGACACTCAGTTAACATCATCCAATATTGGATTCAAGCTTCTCCAAAAGATGGGTTGGAAAGGGAAGGGTCTTGGGAAGGATGAGCAAGGAATTATTGAACCAATAAAATCTGGGATCAGAGATCCACGATTGGGAGTAGGTAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATATTCAGCGGAAAAAACTTGACATTGAGTTAGAGGAGACAGAGGAAAATGCAAGGAAGCGGGAGGTGTTAGCAGAACGAGAGCAAAAAATCCAAACCGAGGTTAAAGAAATACGAAAAGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCAATGGAATTTGAAGCACACCTGAGCTCGTATGATCATAATCACAAAAAGCGCTTCAAACAAATGAAGGAAATGCACGGTAGTAGTAGCCGAGATGATAGGCAAAAGCGAGAACAGCAACGTCAAGAGAGAGAAATGGCTAAGTTTGCTCAAATTGCTGATGCGCAAAAGCAACAACAGCTTCAACAGCAACAAGTAGAATATGCGTCTCCTCCAGTTTCCTCAGACTCTAGAACTGCTACAGCACTTGCTGATCAAGATCAGCGGAAGACACTGAAGTTTGGGTTTTCGTCTAAAGGCAGTGCCCCCAAGAATTCATTTGGTGGTGGATCTGCAAAAAAGCAAAAAGTTGCGATGTCCTCTGTATTCGGCAGTGATACTGATGAAGAATAG 1002 0.4301 MAQIATRTRSYHCSSARTLLLIYIETWVDTKMEYRWTKGRQETVARDRRQFGKEQTYQDSLIEDISEDFRLPINQRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDIELEETEENARKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHKKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQQLQQQQVEYASPPVSSDSRTATALADQDQRKTLKFGFSSKGSAPKNSFGGGSAKKQKVAMSSVFGSDTDEE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1534 333 ProSiteProfiles G-patch domain profile. 97 142 IPR000467 GO:0003676
Bisa07g1534 333 SUPERFAMILY beta-beta-alpha zinc fingers 190 227 IPR036236 -
Bisa07g1534 333 ProSitePatterns Zinc finger C2H2 type domain signature. 194 216 IPR013087 -
Bisa07g1534 333 MobiDBLite consensus disorder prediction 256 308 - -
Bisa07g1534 333 Pfam Zinc-finger double-stranded RNA-binding 192 219 IPR022755 -
Bisa07g1534 333 SMART G-patch_5 95 140 IPR000467 GO:0003676
Bisa07g1534 333 Pfam G-patch domain 98 138 IPR000467 GO:0003676
Bisa07g1534 333 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 32 333 - -
Bisa07g1534 333 MobiDBLite consensus disorder prediction 223 253 - -
Bisa07g1534 333 MobiDBLite consensus disorder prediction 223 333 - -
Bisa07g1534 333 Coils Coil 147 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1534 Bisa-ChrBisa07 38427197 38430968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1534 32 333 C2H2 Transcription Factor Family AT5G26610 67.763 4.25e-131 374