Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1505 ATGCAAGGGAAGATGCGAAGGGTTTCAAAGACTGAAATCAAGGCCCCTCAAGCCAATGTTACCACCCATGCCAATGATGCTCCAAAACAGGGTTCGTCTGACGACTCGGACAGCTTCTACAACAAACTCGGCGAGTTGTGGGAGCCCCTTGGACTCAATCTAATTATTGATGCCCGAGAAACATCACTGGACTTGTACCTGTTTTACTCGGAAGTCACCAGAAGAGGAGGATTTCATCAGGTGAGCAGAGACAGGAAATGGGATGAAGTTGTGTCGGCCTTAAAATTAGAAGGCAGTAATGTGAAGTTACATGCTCAACTTGAAAAATGCTACGCTTTACTTCTTTACCAATTTGAGCAACTCTACCATTACAGGGATCCTGCGCTGAAAGCTTCCACTAACACCACCTTAGGTATGCTTCCAGAGGTAAGCTTGGAAAGGAAGCGGAAAACTGAGGCTAGTTTATCTGAATTAATGGATAATGAAGATGCTAAAATGGGGACAAGGGTGTGCAAGGAAATGAAAGGTGCTGAGCTTGCAGAACAGCAAGTGCTGCTTCTGACACCCTCAAAGCACAGGGAAGTGAAGAAACGTCAAGGACGGAAACATAGAACTGCATATCAGATTTTCGTCAAGCAGGAATGTGCTCGATTGAGAACTTATAATGAGTCCCCAGTCAGCTCAAATATGCTACACATGGCCATAGATGCATGGAAGAAGCTGTCCGAGATTGAAAAGCAGCCGTATGTGGAGGAAAGCAAAAAGGAAAAGGAAAGATTGATGGTAGAGATGAGCAGTCAGAACGGGAAGGAAGGGAATGCTGAGGCTGGTGCTGATGGTGACCACCATGTTATTACTCTGCAACCTGATGCAGTCCACTCTGGTAAAATGACCGAAGAAGAACCGAAAGATCCATTATACCAAGTTGACAGTGATGCTTATTCACTGGATATGCCATTACCAACTGAAGCATCAAAGTAA 981 0.4495 MQGKMRRVSKTEIKAPQANVTTHANDAPKQGSSDDSDSFYNKLGELWEPLGLNLIIDARETSLDLYLFYSEVTRRGGFHQVSRDRKWDEVVSALKLEGSNVKLHAQLEKCYALLLYQFEQLYHYRDPALKASTNTTLGMLPEVSLERKRKTEASLSELMDNEDAKMGTRVCKEMKGAELAEQQVLLLTPSKHREVKKRQGRKHRTAYQIFVKQECARLRTYNESPVSSNMLHMAIDAWKKLSEIEKQPYVEESKKEKERLMVEMSSQNGKEGNAEAGADGDHHVITLQPDAVHSGKMTEEEPKDPLYQVDSDAYSLDMPLPTEASK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1505 326 Coils Coil 250 270 - -
Bisa07g1505 326 Pfam HMG-box domain 201 266 IPR009071 -
Bisa07g1505 326 Pfam ARID/BRIGHT DNA binding domain 37 119 IPR001606 GO:0003677
Bisa07g1505 326 MobiDBLite consensus disorder prediction 14 36 - -
Bisa07g1505 326 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 27 270 - -
Bisa07g1505 326 SUPERFAMILY ARID-like 29 126 IPR036431 GO:0003677
Bisa07g1505 326 SMART bright_3 34 124 IPR001606 GO:0003677
Bisa07g1505 326 MobiDBLite consensus disorder prediction 262 326 - -
Bisa07g1505 326 CDD HMG-box_SF 202 259 - -
Bisa07g1505 326 ProSiteProfiles ARID domain profile. 33 123 IPR001606 GO:0003677
Bisa07g1505 326 MobiDBLite consensus disorder prediction 1 36 - -
Bisa07g1505 326 SUPERFAMILY HMG-box 198 265 IPR036910 -
Bisa07g1505 326 Gene3D High mobility group box domain 195 279 IPR036910 -
Bisa07g1505 326 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 200 268 IPR009071 -
Bisa07g1505 326 Gene3D - 14 136 IPR036431 GO:0003677
Bisa07g1505 326 SMART ARID_2 30 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1505 62 264 ARID Transcription Factor Family AT1G55650 26.147 3.47e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bisa07g1505 ARID 7.3e-12 CL0123