Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1490 ATGGCACAACCCAGCAACAACGTCGCTGGGGTCGACAACACGTTCAGAAGAAAATTTGATCGAGAGGAGTATTTGGAACGAGCTCGAGAGCGTGAGCGGAAGGAGGAAGAGGCACGATCTAGACCTAAAACTAAAGGTCCTCCAGTGCAGAGGAAACCCTTGAAACATAGAGATTATGAAGTAGACCTTGAATCCCGCTTGGGCAAGACTCAGGTTGTTACTCCAGTTGCACCACTAAGCCAGCAGGCTGGATACTACTGCTCAGTTTGTGAGTGTGTGGTAAAGGATTCAGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTCTGGGAATGTCTATGCGAGTAGAACGTGCTTCTCTTGAACAGGTTCAGGGAAGATTTGAGATTCTTAAGAAACGTAAAGATGTTGGCAGCTTCACAGAGCAAGATCTTGATGACCGGATCTTGAGACAACAACAAGAGGAGGAAGAAAGGAAGCGACAGCGTCGAGAAAGGAAAAAAGAAAAGAAGAAGGAGAAAGAAGTTGAAGAAACACCTGAAACCGATCCTGATGTTGCAGCTATGATGGGGTTTGGTGGTTTCCGATCATCCAAGAAGTGA 612 0.4542 MAQPSNNVAGVDNTFRRKFDREEYLERARERERKEEEARSRPKTKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQGRFEILKKRKDVGSFTEQDLDDRILRQQQEEEERKRQRRERKKEKKKEKEVEETPETDPDVAAMMGFGGFRSSKK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1490 203 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 10 203 IPR040107 GO:0000398|GO:0005681
Bisa07g1490 203 MobiDBLite consensus disorder prediction 148 184 - -
Bisa07g1490 203 MobiDBLite consensus disorder prediction 20 44 - -
Bisa07g1490 203 Coils Coil 21 41 - -
Bisa07g1490 203 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Bisa07g1490 203 Coils Coil 153 182 - -
Bisa07g1490 203 MobiDBLite consensus disorder prediction 20 56 - -
Bisa07g1490 203 Pfam Zinc-finger of C2H2 type 85 109 - -
Bisa07g1490 203 MobiDBLite consensus disorder prediction 148 203 - -
Bisa07g1490 203 FunFam zinc finger matrin-type protein 2-like 79 117 - -
Bisa07g1490 203 SUPERFAMILY beta-beta-alpha zinc fingers 80 126 IPR036236 -
Bisa07g1490 203 Gene3D Classic Zinc Finger 79 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1490 Bisa-ChrBisa07 37878348 37881323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1490 5 147 C2H2 Transcription Factor Family AT3G05760 81.119 8.29e-84 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g1490 zf-C2H2_jaz 1.9e-06 CL0361