Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1484 ATGGGTAGCGGGAAGGAGCACGATCTGGAGCTAGAGAAAGCTCGTTTAGTGAGCTTGGCTCTTGATTTCGGTTTCGACGAAGACTCTGCCAAGAAATGTCTGGATCGTCTCGTTACTCTCTATGGCGACGATGGCCAGGATTTTATCACTGTGGAGTGCTGTGGTGATGATTTTCTCGCAACTTTAGCTGATTCAATGCAAGATACTGAGGAATGGGATGATTTACAGGCATTGGAATCAGAAGCTTGTGGAACATTGACCAACGTGCTTGACAAAACTGTTGCCAGGTGTAAGTATGAAGATAATAGCATTTCAGGAGGTTACATCAATATTCTTGAGGATTCACCTGAACGTCAAAAACACCAGAAAGTGGTAGAGTTAAATTCAAGTGATGAGGATATGGACTTCAGTATTTCAGAGGAAACATATGCACTTCCGAGGTCCTGTTTGAAACCTCATCTATTTGCGGATCAACAGTCTCCAAAATCAGGGGATTGCAGGAGTAGCATCACTCAGGGTTCAATTTCTTCAACTTCCAGCAAAATAAGAAGCTTGTCAACATCAAAGGATGTAAATAGGACTCTCACATATGAAGAATTACAGGAACTAGATAACATTGAAATGGCAAATGTTGTGATATTTGGTAATAGGACATTTCGACCGTTGCAGCATGAAGCTTGTGAAGTAGCTTTGGCAAAGCAAGATTGTTTTATTCTTATGCCTACTGGGGGTGGTAAGTCTCTTTGTTATCAGCTTCCAGCAACTCTTCAATCAGGTGTTACAGTAGTTGTATCTCCCTTACTTTCGCTCATTCAGGACCAGATAATCACGCTGAACCTCAAGTTTGGAATACCAGCTACATTTTTAAATTCTCAACAAACTAATTCACAAGCAGCAGCTGTGCTCCGAGAGCTAGGAAAAGACAAACCATCGTGCAAACTGTTGTATGTGACACCTGAGAGAATTGCTGGCAATAAATCATTTCTTGATGTTCTAAAATGCATGCATCGCAAGGGACAGCTGGTAGGTTTTGTTATTGATGAGGCACACTGTGTTAGCCAATGGGGACATGATTTCCGGCCTGATTATCGGGAATTAGGATGTCTTAAGCTGAACTTTCCAGAGGTACCTGTCATGGCATTGACTGCCACCGCAACCCACACTGTCCGCAAGGATATTTTGAATGCTTTAAGAATCCCCCATGCGATTGTTCTTGAAAGAAGCTTTGACAGACCAAACTTGAAGTACGAAGTCATTGTTAAGACAAAGGAGCCCCTAAAGCAACTTGGGAAGCTACTTATGGATCGTTTCAGGAATCAGTGTGGGATTGTTTACTGCCTTTCAAAAAGTGAATGTGTTGATGTCTCAAACTTTTTGAACGAGAAATGTAAGATTAAGACAGTGTACTACCATGCTGGCTTGGCTGCTCGCCAAAGAGTTGCTGTTCAAAAGAGATGGCACGAGGGAGAGGTTCATATTGTATGCGCAACTATTGCTTTTGGAATGGGGATAGACAAGCCTGATGTTCGCTTTGTCATCCACAATACATTGTCAAAATCAATTGAAAGCTATTATCAAGAATCAGGAAGGGCTGGAAGAGATAATCTACCTGCAGTTTGCATTGCTCTATACCAGAAGAAGGATTTTAGTAGAGTTGTATGCATGTTGAGAAATGGCCAAGGATATAAAAAAGAAAGTTTTAAGACGGCAATGGCTCAAGCCCAAAAGATGCAACAATATTGTGAACTGAAGGATGAATGCCGGAGGCAAACTTTACTCAAACACTTCGGAGAATCTTTTGACAGAAAGGCCTGCAAATATGGATCTAACCCCTGTGATAATTGTATCAAGACTACGCTATGA 1863 0.4165 MGSGKEHDLELEKARLVSLALDFGFDEDSAKKCLDRLVTLYGDDGQDFITVECCGDDFLATLADSMQDTEEWDDLQALESEACGTLTNVLDKTVARCKYEDNSISGGYINILEDSPERQKHQKVVELNSSDEDMDFSISEETYALPRSCLKPHLFADQQSPKSGDCRSSITQGSISSTSSKIRSLSTSKDVNRTLTYEELQELDNIEMANVVIFGNRTFRPLQHEACEVALAKQDCFILMPTGGGKSLCYQLPATLQSGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQTNSQAAAVLRELGKDKPSCKLLYVTPERIAGNKSFLDVLKCMHRKGQLVGFVIDEAHCVSQWGHDFRPDYRELGCLKLNFPEVPVMALTATATHTVRKDILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGKLLMDRFRNQCGIVYCLSKSECVDVSNFLNEKCKIKTVYYHAGLAARQRVAVQKRWHEGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMLRNGQGYKKESFKTAMAQAQKMQQYCELKDECRRQTLLKHFGESFDRKACKYGSNPCDNCIKTTL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1484 620 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 227 403 IPR014001 -
Bisa07g1484 620 CDD DEXHc_RecQ 213 410 - -
Bisa07g1484 620 Pfam DEAD/DEAH box helicase 221 390 IPR011545 GO:0003676|GO:0005524
Bisa07g1484 620 SMART helicmild6 453 535 IPR001650 -
Bisa07g1484 620 Pfam Helicase conserved C-terminal domain 428 534 IPR001650 -
Bisa07g1484 620 Gene3D - 411 619 IPR027417 -
Bisa07g1484 620 FunFam ATP-dependent DNA helicase 200 410 - -
Bisa07g1484 620 Pfam RecQ zinc-binding 547 615 IPR032284 -
Bisa07g1484 620 Gene3D - 177 410 IPR027417 -
Bisa07g1484 620 SMART ultradead3 215 419 IPR014001 -
Bisa07g1484 620 NCBIfam RecQ family ATP-dependent DNA helicase 213 618 IPR004589 GO:0004386|GO:0006310
Bisa07g1484 620 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 425 575 IPR001650 -
Bisa07g1484 620 PANTHER DNA HELICASE RECQ FAMILY MEMBER 199 615 - -
Bisa07g1484 620 CDD SF2_C_RecQ 411 544 - -
Bisa07g1484 620 FunFam ATP-dependent DNA helicase 411 618 - -
Bisa07g1484 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 259 555 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1484 Bisa-ChrBisa07 37697535 37702875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1484 344 553 Eukaryotic Initiation Factors Gene Family AT5G11170 24.651 3.21e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1484 07 37697535 37702875 Bisa07g1484 07 37697535 37702875 ECH