Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1478 ATGAATGTGAGAGATATTCAGGGTGAGGGATTTCCAGATGAATTTGCTGTTCTGAGATCAAAAGATGGTGCTAATGAAATAATCATAGTGAATAAAGCTTCCAGCCATTCAAGAAAGGTGGGAAAGTCGTCATCTATATGGGATGCTAAGGCAGGATTTGCAGGCCAATGCTTCAATTCCATCTGCAGAATTTGCTCCCTATCAGTGCTATATATAGAGGTTGCCAAGAGGACTGATAAGGAGGCACCGCCTTGCACTCATTATGCACAGCTTGGAATTTGTAAATTTGGCCTAGCATGCAAATTTGATCATCCTATGGGAGCACTGAGTTATAATAGTCCATCTGCTTCTTCCCTGGCCGATGATGAAGATGATGGGGCAAGAGTTTCAATAGATGAACCCATCATCTTCATCATCGGATTTGCGGCCTGA 432 0.4282 MNVRDIQGEGFPDEFAVLRSKDGANEIIIVNKASSHSRKVGKSSSIWDAKAGFAGQCFNSICRICSLSVLYIEVAKRTDKEAPPCTHYAQLGICKFGLACKFDHPMGALSYNSPSASSLADDEDDGARVSIDEPIIFIIGFAA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1478 143 ProSiteProfiles Zinc finger C3H1-type profile. 79 107 IPR000571 GO:0046872
Bisa07g1478 143 Gene3D - 73 128 - -
Bisa07g1478 143 SMART c3hfinal6 80 106 IPR000571 GO:0046872
Bisa07g1478 143 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 83 106 IPR000571 GO:0046872
Bisa07g1478 143 SUPERFAMILY CCCH zinc finger 80 108 IPR036855 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1478 81 120 C2H2 Transcription Factor Family AT5G18550 47.500 2.95e-06 43.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa07g1478 zf-CCCH 2.2e-08 CL0537