Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1468 ATGTCGTATCGCCCTACCGGTAACTCTAGGACCGAGGTCCGTCGGAATCGTTACAAGGTAGCGGTCGATGCTGAAGAAGGTCGTAGACGGCGAGAGGATACCATGGTCGAGATCCGCAAGAACCGTAGAGAAGAGAGTTTGCAGAAGAAGAGGCGCGAGGGCCTCCAAGCTCAGCAGATGCCTGCTTCAATCCATTCTACTGCCGTTGAGAAGAAGTTGGAACACCTACCATCCATGGTTGCAGGTGTTTGGACTGATGATAATACCTTGCAGCTTGAGTCGACAACTCAGTTTCGGAAGTTGCTTTCAATTGAACGCAGCCCACCAATCGAGGAGGTTATACAAGCTGGTGTAGTTCCTCGCTTTGTTGAATTTTTGATGAGGGAAGACTTTCCCCAACTGCAGTTTGAGGCAGCTTGGGCTTTGACAAATATTGCTTCTGGAACATCTGAAAACACTAAGGTGGTAATTGATCATGGAGCTGTCCCAATTTTTGTCAAACTCCTTGGTTCTCCAAGCGACGATGTTCGTGAACAGGCTGTGTGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGATGCCGCGATCTTGTCCTCAGTCATGGGGCCTTGCATCCTCTGTTGACACAGTTGAATGAGCAAGCTAAGCTTTCTATGCTCAGAAATGCTACCTGGACACTTTCAAACTTCTGCAGGGGCAAGCCACAACCTCCGTTTGATCAGGTTAAACCTGCACTTCCTGCTCTTGCCCGTCTTATCCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGTTGGGCACTGTCATATCTTTCTGATGGCACAAATGACAAAATTCAAGCAGTAATTGAAGCTGGTGTATGTGGTCGGCTTGTTGAGCTTCTATTGCATCCATCCCCTTCTGTGCTTATTCCTGCTCTTCGTACAGTTGGAAATATTGTCACTGGAGATGATATGCAGACCCAGGTTATCATCAATCATCAAGCTCTTCCTTGCCTTTTGAATCTGTTGACAAATAATTATAAAAAAAGCATAAAGAAGGAAGCTTGTTGGACCATATCAAATATCACTGCTGGGAATAAACAGCAGATTCAGGCTGTAATTGAGGCTAATATAATTGGTCCTCTTGTCTTCCTTCTTCAAAACGCTGAGTTTGATATTAAGAAAGAGGCTGCTTGGGCTATCTCAAATGCTACCTCTGGTGGATCTCATGATCAAATCAAGTACCTTGTCAGTCAGGGGTGTATTAAGCCCTTGTGTGATCTTCTCATTTGTCCTGATCCAAGAATTGTGACTGTTTGTCTGGAGGGGCTTGAAAACATCTTGAAGGCGGGAGAGGCTGATAAAAATGTGGGTAACACTGGAGGCGTGAATCTAGTCATGACAACACTGAGATTTATGAAAAAGCGGTGA 1413 0.4544 MSYRPTGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGLQAQQMPASIHSTAVEKKLEHLPSMVAGVWTDDNTLQLESTTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALHPLLTQLNEQAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCGRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQVIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVIEANIIGPLVFLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKAGEADKNVGNTGGVNLVMTTLRFMKKR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1468 470 PANTHER IMPORTIN ALPHA 14 457 - -
Bisa07g1468 470 PIRSF Importin_alpha 6 465 IPR024931 GO:0005737|GO:0006606|GO:0061608
Bisa07g1468 470 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Bisa07g1468 470 FunFam Importin subunit alpha 13 52 - -
Bisa07g1468 470 SUPERFAMILY ARM repeat 10 452 IPR016024 -
Bisa07g1468 470 Gene3D - 12 52 IPR036975 GO:0006606
Bisa07g1468 470 FunFam Importin subunit alpha 74 465 - -
Bisa07g1468 470 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Bisa07g1468 470 SMART arm_5 190 232 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 106 147 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 275 315 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 149 189 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 360 400 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 234 273 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 403 443 IPR000225 GO:0005515
Bisa07g1468 470 SMART arm_5 317 358 IPR000225 GO:0005515
Bisa07g1468 470 MobiDBLite consensus disorder prediction 40 62 - -
Bisa07g1468 470 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Bisa07g1468 470 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Bisa07g1468 470 Gene3D - 74 465 IPR011989 -
Bisa07g1468 470 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 318 358 IPR000225 GO:0005515
Bisa07g1468 470 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1468 Bisa-ChrBisa07 37466380 37470285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1468 239 470 U-box Gene Family AT2G23140 23.605 4.60e-06 47.4