Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1466 ATGTCAAATGCTTCTGTCTGTACTTCCCCCGTTTTTGTGCTGATGAATTTTAGCCTAAGTTTTATTATACATTCTCTGATTAGTGCTGCAACATCACCACTCGCCAATTTCACTTTCTCTCCAGTTTCTCCTTCTCGGGCCATTCTTTCCGTGTTTGCAATTCTCACTTTCCCCATTGCCGGTTTCAATCTTTCTCGTCAATTGCTCGCTCTGTGTCTGGTTTCCGATACGGAAACGCCATCGGAGGAATCGAGTGAGAACAAGAAGTGCTGTACTGATTGCAAAACCACTAAAACCCCACTGTGGAGAGGAGGTCCCGCCGGGCCCAAGACCCTGTGCAACGCTTGCGGGATCAGGTACAGGAAGAGAAGGGCTTCTGCAGTGGAATTGAACAAAGGACAAGACAGAAAAAGAGACAGATCTCAGAGTTCAAGTGGTGGTGCTGCAAGCGCCTTCACCATGACTACCGCCAGCACCGTCGCTTCCGTTGCTAAAGGTGTTGGTGTTAGTGGCGGCGATTTGAACGAGTCTCTGAGAATGAACATAGTGGGATTAGGCGAGGAGGTCTTGTTGCAGCAAATACCCTCAGTGTTGAAGAAACAAAGATGCCAGAGGAACAGGAAGTTAGGGGAGGAAGAACAAGCCGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTGTTTTCGCCTGA 690 0.4826 MSNASVCTSPVFVLMNFSLSFIIHSLISAATSPLANFTFSPVSPSRAILSVFAILTFPIAGFNLSRQLLALCLVSDTETPSEESSENKKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASAVELNKGQDRKRDRSQSSSGGAASAFTMTTASTVASVAKGVGVSGGDLNESLRMNIVGLGEEVLLQQIPSVLKKQRCQRNRKLGEEEQAAFCLMALSCGFVFA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1466 229 CDD ZnF_GATA 91 124 IPR000679 GO:0006355|GO:0043565
Bisa07g1466 229 SMART GATA_3 85 135 IPR000679 GO:0006355|GO:0043565
Bisa07g1466 229 MobiDBLite consensus disorder prediction 128 142 - -
Bisa07g1466 229 Pfam GATA zinc finger 91 124 IPR000679 GO:0006355|GO:0043565
Bisa07g1466 229 PANTHER OS01G0976800 PROTEIN 76 228 - -
Bisa07g1466 229 ProSiteProfiles GATA-type zinc finger domain profile. 85 121 IPR000679 GO:0006355|GO:0043565
Bisa07g1466 229 MobiDBLite consensus disorder prediction 128 150 - -
Bisa07g1466 229 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 86 124 - -
Bisa07g1466 229 ProSitePatterns GATA-type zinc finger domain. 91 116 IPR000679 GO:0006355|GO:0043565
Bisa07g1466 229 Gene3D - 86 146 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1466 Bisa-ChrBisa07 37456608 37465766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1466 85 229 C2C2-Gata Transcription Factor Family AT5G49300 44.138 9.98e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa07g1466 GATA 7.6e-17 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1466 07 37456608 37465766 Bisa07g1466 07 37456608 37465766 ECH