Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1464 ATGGCTACGAGGAACCGCACTTTGCTCTATAGGAAGTACAGAGATGCCTTGAAGAGTGTTCGGGTTCCGTCGAGCTCTCCGGCGGCGACGAGCTCCGGTGGTGCTGGTGGCCCGGTGATTGAATTGGTCAGTACGTCGCTTTTGAATCAGAATCGTTCGTATGCTCCGCTTAGTACCGTTGATCCTGGTAATTCGAGTAAGGGTCCACTTACTGTGGGGCTACCTCCGGCATGGGTGGATGTCTCTGAAGAGATATCAGCAAATGTGCAACGTGCACGCACAAAAATGGCAGAGTTGGCCAAGGCCCATGCAAAGGCTTTGATGCCATCATTTGGAGATGGTAAGGAGGAGCAACGGGCTATTGAGAATCTAACTCATGAAATAACTGACTTAATAAAGAGATCAGAGAAGAGACTAAAGAGACTTTCTGCTTCTGGACCTTCTGAGGATTCCAATGTGAGGAAAAATGTGCAGCGTTCTTTGGCTACTGACCTTCAGAACCTCTCCATGGATCTCCGGAAGAAACAATCAACTTATTTGAAGCGACTCAGACAGCAAAAAGAGGGTCAAGATGGGGTGGATCTAGAGATGAACATAAATGGAAGTAAATCCAGATTTGAAGATGACGCATTGGACAATATGGTATTTAATGAGCATCAGATGGCCAAGCTGAAGAAAAGTGAAGCGTTCACAGTAGAAAGAGAAAAAGAGATCCACCAGGCAAGCAAAAGTTCCTTAATTGCTGTTGTGGAATCTGTAAACGAGCTTGCTCAGATTATGAAGGATTTATCTGTACTAGTAATAGACCAGGGAACCATTGTTGATAGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGAGGAAGGCCTTAAACAGCTGCAGAAGGCAGAGAGAACACAAAAAAAAGGAGGCATGGTGATGTGTGCTACGGTGCTTGTTATCATGTGCTTCGTTATGTTGATTCTCTTAATCCTTAAGGAAATACTTTTGTGA 999 0.4464 MATRNRTLLYRKYRDALKSVRVPSSSPAATSSGGAGGPVIELVSTSLLNQNRSYAPLSTVDPGNSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEEQRAIENLTHEITDLIKRSEKRLKRLSASGPSEDSNVRKNVQRSLATDLQNLSMDLRKKQSTYLKRLRQQKEGQDGVDLEMNINGSKSRFEDDALDNMVFNEHQMAKLKKSEAFTVEREKEIHQASKSSLIAVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKKGGMVMCATVLVIMCFVMLILLILKEILL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1464 332 SMART tSNARE_6 231 298 IPR000727 -
Bisa07g1464 332 CDD SNARE_syntaxin16 233 297 - -
Bisa07g1464 332 SUPERFAMILY t-snare proteins 74 291 IPR010989 GO:0016020|GO:0016192
Bisa07g1464 332 PANTHER SYNTAXIN 81 318 IPR045242 -
Bisa07g1464 332 FunFam Syntaxin-43 75 290 - -
Bisa07g1464 332 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 236 298 IPR000727 -
Bisa07g1464 332 Coils Coil 82 102 - -
Bisa07g1464 332 Coils Coil 114 134 - -
Bisa07g1464 332 Gene3D - 75 290 - -
Bisa07g1464 332 Pfam SNARE domain 272 324 IPR000727 -
Bisa07g1464 332 SMART SynN_4 69 184 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1464 Bisa-ChrBisa07 37442509 37446275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1464 1 332 SNARE and Associated Proteins AT5G26980 76.347 0.0 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1464 07 37442509 37446275 Bisa07g1464 07 37442509 37446275 ECH
Bisa03g0296 03 3967436 3971367 Bisa07g1464 07 37442509 37446275 ECH