Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1452 ATGGCCTTCCTTCAACATTTCCTTTTCCTTCTCGTCCTCCTAATACCTTCCTTCCAAACCCAAGCCTTCTTAGACGAAATCCCTTCAGACACCAACAATAACAAACTCGACATGCACGCTTTGATTGCCCAAGCCTGCATGGACGTCGAAAACCAAAACTCGTGCCTCACCAGCATCCAAAACGACGTCGTCAAGCACGGCCCTCCGAGCCCATCTTCAGTCGTCACTGCCGCTCTCAGAGCCACACTCAACGAGGCCATCGGCGCCATCGACAAAATCACCAAGTTCAGCACCTTCTCCATCAGCTACAGAGAGCAAATGGCCATCGAAGACTGCAAGGAGCTTCTAGATTTCTCTGTGTCCGAGCTGGCATGGTCGTTAGGCGACATGCGGAAAATCCGGGCTGGCGACAAAAGCGTGGACTACGAGGGCAACCTCCAAGCGTGGCTCAGTGCAGCATTGAGCAACCAGGACACGTGTCTTGAGGGGTTCGAAGGCACAGACATGCGTCTTCAGGGCTATATAAGTGGAAGCTTGACCCAAGTCACGCAGCTCATAAGCAATGTTCTAGCTCTGTACACTCAATTGCACGCCTTACCCTTTCAATCTCCACGAAACAGGACGAGTAGTGTGACGAATGAGGTGACGTCGGAGTTCCCGGAGTGGATGACGGAGGCTGATCAGGAACTGTTGAAAGCTCGGCCACGTGGAGTGCACGCGGACGCCGTTGTGGCTTTGGACGGAGGCGGGCATTACCGGTCTATTGCGGAGGCGGTGAATGCGGCTCCTAGCGGGAGTACGAGGAGGTACGTTATTTACGTGAAGAGTGGGCTTTATAAGGAGAATGTGGATGTGAAGCGAAAGAAGACCAACATCATGCTCGTTGGAGATGGCATTGGCCGGACCATCGTCACAGGCAGCCGCAACTTCATGCAGGGATGGACCACTTTTCGCACCGCCACTGTTGCTGTGTCGGGGAAGGGATTCATAGCGAGGGACATGTCATTTCGGAACACCGCCAGACCGGAAGACAACCAGGCGGTGGCGCTGCGTGTGGACTCCGACCAATCGGCGTTCTACAGATGCAGCATAGAAGGCCACCAAGACACCCTCTACGCCCACTCTCTCCGACAGTTCTACAGAGAATGCGAGATCTATGGCACAATCGACTTCATCTTCGGCAACGGAGCTGCAGTGCTGCAAAACTGCAAGATTTACACCAGAGTACCACTTCCCTTGCAGAAGGTCACCATCACGGCCCAAGGCCGAAAAAGCCCACATCAGAGCACTGGCTTCATCATCCAGGATAGCTACGTTCTGGCGACCCAGCCCACCTATTTGGGCCGGCCCTGGAAGCAGTATTCCAGGACGGTTTACATGAACACGTACTTGGGTGGGCTTGTCCAGCCCAGAGGGTGGCTCGAGTGGAATGGCCATTTTGCCTTGAACACGTTGTGGTATGGCGAGTATAGGAATTATGGGCCCGGGGCCTCTGTCGCGGGTCGGGTCAGATGGCCCGGTTTCCACATTATTAAAGATGCCGCCACTGCTAGTTACTTCACAGTTCAGCGGTTCATTGATGGCGATTCGTGGTTGCCGGCGACGGGTATTAAGTTCACAGGTGGGTTGACCGACTAA 1638 0.5427 MAFLQHFLFLLVLLIPSFQTQAFLDEIPSDTNNNKLDMHALIAQACMDVENQNSCLTSIQNDVVKHGPPSPSSVVTAALRATLNEAIGAIDKITKFSTFSISYREQMAIEDCKELLDFSVSELAWSLGDMRKIRAGDKSVDYEGNLQAWLSAALSNQDTCLEGFEGTDMRLQGYISGSLTQVTQLISNVLALYTQLHALPFQSPRNRTSSVTNEVTSEFPEWMTEADQELLKARPRGVHADAVVALDGGGHYRSIAEAVNAAPSGSTRRYVIYVKSGLYKENVDVKRKKTNIMLVGDGIGRTIVTGSRNFMQGWTTFRTATVAVSGKGFIARDMSFRNTARPEDNQAVALRVDSDQSAFYRCSIEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFIIQDSYVLATQPTYLGRPWKQYSRTVYMNTYLGGLVQPRGWLEWNGHFALNTLWYGEYRNYGPGASVAGRVRWPGFHIIKDAATASYFTVQRFIDGDSWLPATGIKFTGGLTD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1452 545 CDD PMEI-like_3 54 198 - -
Bisa07g1452 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 196 IPR035513 -
Bisa07g1452 545 Pfam Pectinesterase 241 529 IPR000070 GO:0030599|GO:0042545
Bisa07g1452 545 SUPERFAMILY Pectin lyase-like 238 542 IPR011050 -
Bisa07g1452 545 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Bisa07g1452 545 SMART PMEI_2 37 192 IPR006501 GO:0004857
Bisa07g1452 545 PANTHER PECTINESTERASE 15 533 - -
Bisa07g1452 545 NCBIfam pectinesterase inhibitor domain 5 197 IPR006501 GO:0004857
Bisa07g1452 545 Pfam Plant invertase/pectin methylesterase inhibitor 41 192 IPR006501 GO:0004857
Bisa07g1452 545 FunFam Pectinesterase 39 198 - -
Bisa07g1452 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 197 IPR035513 -
Bisa07g1452 545 Gene3D - 236 543 IPR012334 -
Bisa07g1452 545 FunFam Pectinesterase 235 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1452 Bisa-ChrBisa07 37202933 37205288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1452 10 545 Carbohydrate Esterase AT3G05620 61.566 0.0 688