Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1450 ATGGCCATTTCCAAGTTCTCCATCATAATATACTTCAATCTAATCTTCTTCTCCAACTCTGCGACGTCGTCTCTTTCAGCCTCCTCTTCCTCCAACGATACAGTCTGCGATCTCACACCTTACCCCTCCTTCTGCACATCGAATCTTCCTTCTGGTGATCAAGGCCAAGGTGATTTACGTCACTATGCGCCTTATTTCATAAAGCGCTCGTTATCATTGTCCACCAATTTTCGTTCCTCAGTACTCAAACGCCTAATTAAATCTGCCTCTCATTCTCAAAATTCCGATTCTACCCTCCGTACCCTTCAAGATTGCCACCACCTATCTGACCTCAAACCCTTCAAGAGCGTGTTGGAGATTAATTTTCAATTCCCTCCTGACAATGTTACGGTGAGTCAACGGGTGGTGGTCAACCCGGATGGCTCTGGAAACTTCACCACCAAAAACGACGCCGTAAATGCAGCACCCAACAACACGGGAGGCGCCAATGGCTTCTTTGTGATTCACGTGGTGGCCGGAGTGTACGAAGAGTATGTGTCTGTTCCCAAATATAAGCAGTGCTTGACGATGATCGGAGATGGCATCAACCAAACTGTCATCACCGGCAATCGCAGCGTCGTCGATGGCTGGACCACCTTCAATTCCGCCACATTTGCGGTGGTTGGGCAAGGCTTTGTGGCAGTGAATATAACGTTTCGTAACACAGCAGGAGCAATCAAACACCAAGCTGTAGCACTCCGAAGTGGGGCTGACCTATCAGTGTTTTATAGTTGTAGCGTTGAAGGGGTCGAACCGACATTAACCAAAACACAGGCACATCCATACACAATTGTACAATCACTGCGTCCAGTGACTTGGCTACTAGCAATGCAACCACACAGACATACCTTGGGAGGCCATGGAAGCAATATTGATCCTAAGGGTTGGAGAGAGTGGTCAGGGGATTTTGCATTGGACACCCTTTATTATGCGGAATTTGATAATAGGGGTCCAGGTTCTAACACTAATGCTATAGTTACATGGTCAGGTTACCATGTGATTAATGACACAATTGGTGCTGTTCCCTTCACTGTCTCCCAATACATACTGGGTGACTTTTGGATTCCCGCCACCGCAGTGCCTTACTCTACTGGTTTACTTTGA 1143 0.4716 MAISKFSIIIYFNLIFFSNSATSSLSASSSSNDTVCDLTPYPSFCTSNLPSGDQGQGDLRHYAPYFIKRSLSLSTNFRSSVLKRLIKSASHSQNSDSTLRTLQDCHHLSDLKPFKSVLEINFQFPPDNVTVSQRVVVNPDGSGNFTTKNDAVNAAPNNTGGANGFFVIHVVAGVYEEYVSVPKYKQCLTMIGDGINQTVITGNRSVVDGWTTFNSATFAVVGQGFVAVNITFRNTAGAIKHQAVALRSGADLSVFYSCSVEGVEPTLTKTQAHPYTIVQSLRPVTWLLAMQPHRHTLGGHGSNIDPKGWREWSGDFALDTLYYAEFDNRGPGSNTNAIVTWSGYHVINDTIGAVPFTVSQYILGDFWIPATAVPYSTGLL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1450 380 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 112 IPR035513 -
Bisa07g1450 380 Gene3D - 296 380 IPR012334 -
Bisa07g1450 380 PANTHER PECTINESTERASE 302 369 - -
Bisa07g1450 380 SUPERFAMILY Pectin lyase-like 131 272 IPR011050 -
Bisa07g1450 380 Gene3D - 128 279 IPR012334 -
Bisa07g1450 380 Pfam Pectinesterase 302 365 IPR000070 GO:0030599|GO:0042545
Bisa07g1450 380 Pfam Pectinesterase 135 267 IPR000070 GO:0030599|GO:0042545
Bisa07g1450 380 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 110 IPR035513 -
Bisa07g1450 380 SUPERFAMILY Pectin lyase-like 301 378 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1450 Bisa-ChrBisa07 37171084 37172800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1450 122 380 Carbohydrate Esterase AT2G47550 46.037 2.79e-73 236