Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1449 ATGGCCGGGAATGGAGAGAATAAGAAGAGAATAGCCATTATTGGCGTCTCTTGTGTCTTACTGGTGGGTGTGGTGGTGGCCGTGACAGTCGGGATGACGTGGAAGGACAAAGGCTCGTCGGAGGACACTAACAATAACAACAAAAAAGACGTCTCTACCAAAGTAAAAGCCATCAAAAGCATCTGTTCCCCCACCGACTTCAAACAAGAATGCGAGGAGAGCCTCACCACGGAGGCTAACGGGAACACCACAGACCCCTCGGATCTCATCATGATGGCCTTCAACGTCACCATCAAGAAGATTGAGGCGGCTCTCCAGAAATCCACTCTCCTTCACGAGGTCGAGCAGGACCCCCTCGCCAAGAGCGCCCTTGATACATGTAAGGAGCTGATGCAGTTCTCCATCGACGAGTTCCGCCAGTCCATCGCAACCATCAGTACTTTAGACTTTAACAACCTGGACAAGATCTTCATGAACCTCAAGGTCTGGCTCGGCACCGCCATCACCTATCAGGAGACATGCGTCGACGCCTTCCAGAACACCACCAGCGACGCTGGCAAGAAGATGAAGCAGGTCCTGGAATCTGCCCAGCACATGAGCAGCAACGGCCTCGCCATCATCACCGACATGGCCAACGCCTTGTCCGCTTTCAACTTCACCCGCCAAGGACGACGCCTGCTTCAGGAGGAAATTGACGCCGAGATCATCAGGGAAGAGTCCATCTTGGGACACGGTGGGGATTTCGAGCTTCCCACGTGGTTCGACGAGGCCACCGGCGCTCGCAGGCGAGTCCTCGCAACCGAGAAAGGCAAAATGAAGCCTCACGTCGTGGTTGCCAGAGACGGAAGCGGGCAATTCAAGTCAATCAACGAGGCATTAAAGCTCGTGCCGAAGAAGAACGAGAACCCCTTCGTCATCTACATCAGGGAAGGGGTATACCAAGAGTACGTTTACGTGAAAAAGGAAATGAAGCACGTGGTGTTCATAGGGGACGGTGGGACCAAGACCCGCATCACCGGCAACAAAAGTGTATTCAAATCCAAGGTTGACACCTATAGGTCCTGCACCGTGGCAGTAGAAGGGGATTACTTCATAGCGATCGGCGTGGGGTTCGAGAACACGGCTGGCCCTGACGGCCACCAAGCCGTGGCCCTGAGGGTGCAAGCCGACGCCGCGATCTTCTACAAGTGCCAAATGGATGGATACCAAGACACATTGTACGCACACGCCAAGCGTCAGTTCTACAGGGATTGTGTCATCTCTGGCACCATCGACTTCATATTCGGGGACGCCGACATGGTGATGCAGAACTGCACATTCGTGGTGAGGAAGCCAATGGAGAACCAGGCTTGCATAGTGACAGCGCAAGGGAAGAAGGATCCCCGCCACCTCTCGGCCATAATTATTCACGGAGGCTCCATCGTGGCCGACCCAGAATACCGTCAGGTCAGGTTCAAGAACAAGGCTTACCTTGCTCGTCCCTGGAAGCTGTACTCCAAATTCATCGTCATGGAGACCTTCATCGATGACCTCATCCAGCCAGATGGGTTCCTGCCCTGGGACCCCACCACCCACGTGAACGAGCAGACATGCTTCTATGCGGAGCACAACAACAAAGGGCCAGGCGCTGACAAGTCCAAGCGCGTCAAGTGGGCGGGGATCAAAACCTTAACCCCCGATCAGATCGCCCAATTCACGCCCGGAGGCTACTTCAAGTTCGACAACTGGATTCGCTACACCAGAATTCCTTACAGTCCTGGCACCCTCACCACTACAGCAACTCATTGA 1788 0.5436 MAGNGENKKRIAIIGVSCVLLVGVVVAVTVGMTWKDKGSSEDTNNNNKKDVSTKVKAIKSICSPTDFKQECEESLTTEANGNTTDPSDLIMMAFNVTIKKIEAALQKSTLLHEVEQDPLAKSALDTCKELMQFSIDEFRQSIATISTLDFNNLDKIFMNLKVWLGTAITYQETCVDAFQNTTSDAGKKMKQVLESAQHMSSNGLAIITDMANALSAFNFTRQGRRLLQEEIDAEIIREESILGHGGDFELPTWFDEATGARRRVLATEKGKMKPHVVVARDGSGQFKSINEALKLVPKKNENPFVIYIREGVYQEYVYVKKEMKHVVFIGDGGTKTRITGNKSVFKSKVDTYRSCTVAVEGDYFIAIGVGFENTAGPDGHQAVALRVQADAAIFYKCQMDGYQDTLYAHAKRQFYRDCVISGTIDFIFGDADMVMQNCTFVVRKPMENQACIVTAQGKKDPRHLSAIIIHGGSIVADPEYRQVRFKNKAYLARPWKLYSKFIVMETFIDDLIQPDGFLPWDPTTHVNEQTCFYAEHNNKGPGADKSKRVKWAGIKTLTPDQIAQFTPGGYFKFDNWIRYTRIPYSPGTLTTTATH 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1449 595 FunFam Pectinesterase 54 211 - -
Bisa07g1449 595 SMART PMEI_2 53 206 IPR006501 GO:0004857
Bisa07g1449 595 FunFam Pectinesterase 269 588 - -
Bisa07g1449 595 Pfam Pectinesterase 275 571 IPR000070 GO:0030599|GO:0042545
Bisa07g1449 595 Pfam Plant invertase/pectin methylesterase inhibitor 57 206 IPR006501 GO:0004857
Bisa07g1449 595 Gene3D - 269 588 IPR012334 -
Bisa07g1449 595 SUPERFAMILY Pectin lyase-like 273 587 IPR011050 -
Bisa07g1449 595 ProSitePatterns Pectinesterase signature 2. 420 429 IPR033131 -
Bisa07g1449 595 PANTHER PECTINESTERASE 18 578 - -
Bisa07g1449 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
Bisa07g1449 595 CDD PMEI-like_3 60 212 - -
Bisa07g1449 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 210 IPR035513 -
Bisa07g1449 595 NCBIfam pectinesterase inhibitor domain 54 209 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1449 Bisa-ChrBisa07 37168311 37170098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1449 6 589 Carbohydrate Esterase AT3G05610 46.758 0.0 562