Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1419 ATGGACCAAGCAAGATCTACCTCTGGGAATGCCGAGGATAATGTGGGGATCCCAGATGATTTGAGGTGCAAGAGGTCAGATGGGAAGCAGTGGCGATGCACTGCTATGTCCATGCCGGATAAAACAGTCTGTGAGAAGCACTATATCCAGGCAAAGAAGAGGGCAGCTAATTCTGCAATGAGAGCTAGTTTGAAGAAGGCTAAAAGAAAGTCATTAGGTGAAAGCGACATGTATCTAGAGAGCAAGAGTGAGGATTTTGATGTGCCTCTCGCAAGCATGAAAGTTGGAGAACAGCATTCAGCCTCTGGAAAGAAGTTAATGGACAAGGTATCAAAAAATCAGTATCGATATACAGCGGAGACACCAGCAACTAGGAGTGCCTCTGCGCGCAATGCTCCGAAACCCAATGATGATTCACCAGATGATATCCCCCAGTATGAAGAGAATTGGATGTCTTATGAGTCACCACCTGCTTCTGGAATGGAGTCATCGAGGAAACTATCCCAAAGGAGTTTAGATGCCAATGCTACAACAGAATACTCTGATGGAAGTACAGATTCTTCTAATGACACTGGCGGGCAAACTTGCCATCAATGCCGAAGGAATGACAGAGACAGAGTTATTTGGTGCATGAGATGTAATAAGAGAGGATACTGTGATAGCTGTATATTAACATGGTACTCAGACATGTCATTGGATGAAATTCAGAGGACTTGTCCTGCCTGCCGTGGCACCTGTAATTGCAAAGTTTGCTTACGCAGTGATAATTCCATAAAGGTTCGCATACGTGAGATACCTGTCCTAGATAAGTTACAGTATCTCCACTTGCTGCTGTCATCAGTTCTTCCTGTGGTAAAGCAGATTCATCATGAGCAATGTTTTGAAGTTGAACTCGAAAAGAAGTTGCATGGGATTGAAATAGATCTTCCCAGGACTAAATTGAGTGCAGATGAGCAAATGTGCTGCAACTTCTGTAGGATACCCATTACTGATTATCACCGACACTGCCCAAAATGTACTTACGATTTGTGCCTTAATTGCTGTCGGGATCTTCGAGAAGCAAGCGTAAATCAAGATAAAGTAACTCCATCAAATGAAGCAAAGATTTCTGATCGAAATGTATTAAGTAAATTTCCTGATTGGAGATCCAACAGTGATAGTAGTATTCCATGCCCCCCAAAGAAGTATGGTGGTTGTGGTTATTCATCATTGAATTTAAGCCGCATCTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGTGGAGGAGATGGTTAGTGGCTGCAGGATTAGTGATGCTGGAGGTCCACCAGAAACCAGGTTTAATGATCCCAAATTTTGCCAATATTCTCACAGAGAGGCCTGCAATGATAATTATCTATACTGTCCAGCATCTGCAGATCTCAAAACTGATGGAATTGGCAGTTTTAGAAAGCACTGGAAAAATGGTGAACCAATTACTGTTAAGCAAGTATTTGATAGGTCATCTAGCTGGGATCCAATGGTCATATGGAGAGGCATTCGAGAGACAGCAGATGAGAAATTGAAAGAAGTTGAGAACAGAGTGGTTAAGGCCATAGATTGCTTGACCTGGTCAGAGACAGATATTGAACTTAGTGAGTTCATGAAAGGATACTTTGATGGCCGTAAGCATGAAAATGGTTGGCCACAATTATTGAAGTTGAAGGATTGGCCTTCGCCCAGTGCATCTGAAGAATTTTTATTGCATCAAAGACCTGAATTTATCAGCAAACTACCTTTGCTTGAGTATATTCACTCAAAGTGGGGCCTTCTTAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGGCCCAAGATTTATATATCTTATGGGGTCAATGAGGAACTTGGTAGTGGTGACTCAGTGACCAATCTCCACTTCAATATGCGGGACATGGTGTACCTTTTGGTCCATACCTGTGAGGTGAAGATGAAGGGATGGCAGAGAACTAAAATTGTAAAAATACAGAAAGCACCTGAAGCAAAAGAATCACCTGGGGATCCACAAATACATTCAGAAGGGAGTTCACCTAATTCATCACAAGGTACTGAAAAAAATGAACAGGATAGAGATTCAAACGAGGGGAAGTCAGTTATGGATCAAAAGTTTGAAATCTATTCCACTGCTGAAGGGGACACGGTCAATTCTGACCTTCCAATTGGACAAGATGGAGATGTCTCTAAGAAAACACATCCTGGAGTTCTTTGGGATGTCTTTCGTCGGCAGGATGTTCCAAAGTTGACTGAATTTCTGAAAATGCATTGGAAAGATTTTGGGAAGCCAGATGATATAGTAAACAAATTTGTCACAAGGCCTCTTTATGATGGAGTTATCTTTCTTGACAAACACCATAAAAGAAAGTTGAAAGAAGAATTTGGAGTGGAGCCATGGTCATTTGAGCAGTGTGTGGGGGAAGCTATATTTGTTCCTGCAGGGTGCCCTTTCCAAGCAAGGAATGTTCAGTCCACTGTTCAGTTGGGCCTTGATTTCCTATCACCCGAAAGTCTGGGTGAGGCTGTGAGATTGGCAGAGGAAGTTCGCTGTCTGCCAAATGAACATGAAGCAAAGCTTCAAGTATTGGAGGTTGGGAAGATATCTCTTTATGCAGCAAGTTCAGCCATCAAAGAAGTTCAGAAACTCGTACTTGACCCAAAGCTTGGTGCAGAGATTGGATTTGGAGACCCCAATCTGACTGCTATGGTTTCTGAGAATTACGAGAAGATGGTTAAGCGAAGGCAGATTACTTGTGCTTGA 2790 0.4233 MDQARSTSGNAEDNVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRASLKKAKRKSLGESDMYLESKSEDFDVPLASMKVGEQHSASGKKLMDKVSKNQYRYTAETPATRSASARNAPKPNDDSPDDIPQYEENWMSYESPPASGMESSRKLSQRSLDANATTEYSDGSTDSSNDTGGQTCHQCRRNDRDRVIWCMRCNKRGYCDSCILTWYSDMSLDEIQRTCPACRGTCNCKVCLRSDNSIKVRIREIPVLDKLQYLHLLLSSVLPVVKQIHHEQCFEVELEKKLHGIEIDLPRTKLSADEQMCCNFCRIPITDYHRHCPKCTYDLCLNCCRDLREASVNQDKVTPSNEAKISDRNVLSKFPDWRSNSDSSIPCPPKKYGGCGYSSLNLSRIFKMNWVAKLVKNVEEMVSGCRISDAGGPPETRFNDPKFCQYSHREACNDNYLYCPASADLKTDGIGSFRKHWKNGEPITVKQVFDRSSSWDPMVIWRGIRETADEKLKEVENRVVKAIDCLTWSETDIELSEFMKGYFDGRKHENGWPQLLKLKDWPSPSASEEFLLHQRPEFISKLPLLEYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGVNEELGSGDSVTNLHFNMRDMVYLLVHTCEVKMKGWQRTKIVKIQKAPEAKESPGDPQIHSEGSSPNSSQGTEKNEQDRDSNEGKSVMDQKFEIYSTAEGDTVNSDLPIGQDGDVSKKTHPGVLWDVFRRQDVPKLTEFLKMHWKDFGKPDDIVNKFVTRPLYDGVIFLDKHHKRKLKEEFGVEPWSFEQCVGEAIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRCLPNEHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAEIGFGDPNLTAMVSENYEKMVKRRQITCA 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1419 929 MobiDBLite consensus disorder prediction 681 695 - -
Bisa07g1419 929 SUPERFAMILY Clavaminate synthase-like 478 866 - -
Bisa07g1419 929 Gene3D Cupin 452 868 - -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 156 196 - -
Bisa07g1419 929 Pfam WRC 18 58 IPR014977 -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 669 709 - -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 1 21 - -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 67 83 - -
Bisa07g1419 929 ProSiteProfiles Zinc finger RING-type profile. 196 243 IPR001841 -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 119 196 - -
Bisa07g1419 929 SMART cupin_9 575 859 IPR003347 -
Bisa07g1419 929 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 119 133 - -
Bisa07g1419 929 Pfam JmjC domain, hydroxylase 788 838 IPR003347 -
Bisa07g1419 929 ProSiteProfiles JmjC domain profile. 568 859 IPR003347 -
Bisa07g1419 929 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 893 IPR045109 GO:0032454|GO:0033169
Bisa07g1419 929 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 191 256 IPR018866 -
Bisa07g1419 929 MobiDBLite consensus disorder prediction 55 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1419 Bisa-ChrBisa07 36738520 36744395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1419 18 58 GRF Transcription Factor Family AT3G13960 46.341 3.41e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa07g1419 JmjC 1.8e-05 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1419 07 36738520 36744395 Bisa07g1419 07 36738520 36744395 ECH