Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1417 ATGTCAAACATCACGAGCTGTGATAGTGGGAGTTTCTCCACAGAGAATACCAGAGGAGATGCAGTTATTAAACAGAAGCTAGAAGAAGTAGTTGGTCATCAGTTTAACAGTCCAAATTCTCTTACTTCAACTACCACTAATAGCAATGGTTCTAACGCAAATTCACAAGTGCCTCCTCCTCCTCTTAGGAAGAAACGAAGCCTCCCCGGAAATCCAGATCCAAGTGCTGAAGTTGTAGCTCTATCACCAAACACCCTAATGACCAGAAACCGATTCGTCTGCGAAATCTGCAACAAAGGGTTTCAAAGGGACCAGAACCTGCAATTGCACCGTCGAGGCCACAACCTGCCATGGAAGCTCAAGCAAAGAACGAGCACTGAGCCTCGTAAGAAGGTTTACGTTTGTCCAGAGCCTTCGTGCGTCCACCATAACCCAGCTCGAGCACTGGGCGATCTCACTGGCATCAAGAAGCACTTCTCCAGAAAACATGGAGAGAAGAAATGGAAATGTGACAAGTGTTCCAAGAGATATGCGGTTCAGTCTGATTGGAAGGCACATTCTAAGATATGTGGGACGAGGGAATACAAATGTGACTGTGGCACCATCTTCTCCAGAAGAGACAGCTTCGTGACGCATAGGGCATTCTGTGACGCTCTAGCTGAGGAGAACACCAGGGCCAACAACAACGAACAATTGCCAAAAATACTAGGTTCAAACTCAAACTTATTACAGGGCCACCAACAAATCGCGAATCTCGTTTCTTCCCTACCACCACTCAACACCACCAATCTGATAACCCCACAAATCGGAACCTCCCAATTCAACCACTCCGACATCAAGGAATATCCCCTATCATCACTCCCTCACCATCATCAGGACCTCATGGACATGCCTCCAAAACCACTCGACTACATGGCGGGAAACCTGTTCTCGAGAAGCCTCTCGTCCAATAGTAATTCCATGATGAACGTGTTGGAAATGGAGAAGGATCAGCAATCGGCTCACATGTCGGCCACTGCGTTGTTGCAGAAAGCAGCTCAAATGGGGGCTACTATGAGTAACACAAACTCTTGCATGGCACCCCCGTCGTTCGGGCATGATCAATATGATATTTCATCTTATGGGATGGACGTGATGGGTAATGTGAGTAATGGCGTTGGGAATGGGATGAACAGTGTGGAGATGTTCAATGCGATATTGGATCAGAGCAAGGCGTTGTCGAGGATGATACAGCAGAATAGTCGAAGCAGCAATGTTAGTATTAGCAGTAATTATAATGATAATAATGGAGGTTTGCGTGGTGGTGGGGGAAGTAGTAATAAGGGAAGTGAGGATGTGATGACTGTGGACTTTTTGGGGGTTGGAGGAGCAGCAGGAGGGGGAGCACATGATGCTTTTCTATGGCGTTCAACTGCCTGA 1419 0.4708 MSNITSCDSGSFSTENTRGDAVIKQKLEEVVGHQFNSPNSLTSTTTNSNGSNANSQVPPPPLRKKRSLPGNPDPSAEVVALSPNTLMTRNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEPRKKVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFVTHRAFCDALAEENTRANNNEQLPKILGSNSNLLQGHQQIANLVSSLPPLNTTNLITPQIGTSQFNHSDIKEYPLSSLPHHHQDLMDMPPKPLDYMAGNLFSRSLSSNSNSMMNVLEMEKDQQSAHMSATALLQKAAQMGATMSNTNSCMAPPSFGHDQYDISSYGMDVMGNVSNGVGNGMNSVEMFNAILDQSKALSRMIQQNSRSSNVSISSNYNDNNGGLRGGGGSSNKGSEDVMTVDFLGVGGAAGGGAHDAFLWRSTA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1417 472 MobiDBLite consensus disorder prediction 31 78 - -
Bisa07g1417 472 Gene3D Classic Zinc Finger 71 138 - -
Bisa07g1417 472 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 47 454 IPR031140 -
Bisa07g1417 472 MobiDBLite consensus disorder prediction 1 20 - -
Bisa07g1417 472 FunFam protein indeterminate-domain 5, chloroplastic-like 146 225 - -
Bisa07g1417 472 FunFam protein indeterminate-domain 12-like 71 139 - -
Bisa07g1417 472 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Bisa07g1417 472 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 114 IPR013087 -
Bisa07g1417 472 MobiDBLite consensus disorder prediction 410 441 - -
Bisa07g1417 472 MobiDBLite consensus disorder prediction 32 58 - -
Bisa07g1417 472 Gene3D Classic Zinc Finger 146 226 - -
Bisa07g1417 472 SMART c2h2final6 133 163 IPR013087 -
Bisa07g1417 472 SMART c2h2final6 92 114 IPR013087 -
Bisa07g1417 472 SMART c2h2final6 168 188 IPR013087 -
Bisa07g1417 472 Pfam Zinc finger, C2H2 type 92 114 IPR013087 -
Bisa07g1417 472 SUPERFAMILY beta-beta-alpha zinc fingers 91 188 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1417 Bisa-ChrBisa07 36732112 36735195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1417 59 350 IDZ Gene Family AT1G03840 51.412 1.68e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g1417 zf-C2H2 0.0047 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0530 03 6694880 6698297 Bisa07g1417 07 36732112 36735195 CCT
Bisa07g1417 07 36732112 36735195 Bisa07g1417 07 36732112 36735195 CCT
Bisa07g1417 07 36732112 36735195 Bisa07g1417 07 36732112 36735195 ECH