Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1412 ATGTTTGCTTCAGTAGCCGATACAGGACATGAAGGCAGCGGAGCGTCCGGACCCATTTTGATTCCAAAGCGGTTCGTATGGCCTTACGGGGGCAGAAGGGTGTTTCTAAGTGGTTCTTTCACGAGGTGGTCCGAACACATACCTATGTCTCCGATGGAGGGGTGCCCTACTGTATTTCAAGTTATTTGCAGCTTAATGCCGGGATATCATCAGTACAAATTTAATGTGGATGGTGAGTGGCGGCATGATGAGCAGCAGCCATTTGTTAGTGGGAGCTATGGGATAGTGAATACTATCTTCTTAACAAGAGAAACGGATATTGTACCTTCCATCTTTATTCCTGAGACACCTGGCAGGTCCCATATGGATGTTGATAATGATGTCTTTGGGCAAGTGGAAGCTAATATACAGATGTCAGCATCTGATCTGGGGGTCTCTCGCCACCGTATATCTGTTTTCTTGTCTACACATATTGCTTACGAGTTGCTTCCTGAGTCAGGCAAGGCCATTGTCTTTGATGTCAAATTACCAGTTAAGCAAGCATTCCATATTCTTTATGAACAGGGTGTACCTATGGCCCCTTTATGGGATTCTCACAAGAGCCAGTTTGTTGGAGTGCTTAGTGCCATGGACTTCATTCTAATATTGAAAGAGCTGGGAAATCATGGGTCAAATTTGACTGAAGAACAACTTGAGACCCATACTATAGCAGCATGGAAAGAGGGGAAATTACAACACCGTAGAACAATGGACAATGGGAGATCATATCCTCAGCATTTTGTTCATGGTGGGCCTCATGAGTGTTTGAAAGATGTGGCTTTGAAAATTTTGCAAAAAAAGGTGGCAGCGGTTCCCATTATCCACTCTACTTCACAGGATGGTTCATTTCCTCAGCTGCTACATCTTACTTCCTTATCGGATATACTAAAATGTATATGCCGGCACTTCAAGCATTCTTCTAGTTCGTTGCCCATTCTTCATCTACCAATTGGTTCCATACCATTAGGTACATGGGTGCCAAAAGTTGGGGAATCAAATAGACAGCCACTTGCAATGCTTAGGCCAAATGAATCTCTTGGTGCTGCACTGTCTCTGTTAATTCAAGCTGAAGTTAGCTCTATACCAATAGTAGACGATAATGACTCATTGCTTGACATATATTCCAGAAGTGATATTACTGCATTGGCTAAAGATAAAGCTTATGCACGGATAACCCTTGATGAAATTAGCATCCATCAGGCATTGCTTTTGGGACAAGATGCAAATTCACCTCATGGCTTCTACAATGGTCAGAGATGTCACATGTGTTTGAGGTCTGATTCATTGCATAAAGTGATGGAGCGGTTGGCTAATCCTGGGGTTAGAAGACTAGTGATTGTGGAGCCAGGCAGCAAGCGTGTGGAGGGGATTATTTCATTGAGTGATGTGTTTAGATTCTTATTAGGTTAG 1449 0.432 MFASVADTGHEGSGASGPILIPKRFVWPYGGRRVFLSGSFTRWSEHIPMSPMEGCPTVFQVICSLMPGYHQYKFNVDGEWRHDEQQPFVSGSYGIVNTIFLTRETDIVPSIFIPETPGRSHMDVDNDVFGQVEANIQMSASDLGVSRHRISVFLSTHIAYELLPESGKAIVFDVKLPVKQAFHILYEQGVPMAPLWDSHKSQFVGVLSAMDFILILKELGNHGSNLTEEQLETHTIAAWKEGKLQHRRTMDNGRSYPQHFVHGGPHECLKDVALKILQKKVAAVPIIHSTSQDGSFPQLLHLTSLSDILKCICRHFKHSSSSLPILHLPIGSIPLGTWVPKVGESNRQPLAMLRPNESLGAALSLLIQAEVSSIPIVDDNDSLLDIYSRSDITALAKDKAYARITLDEISIHQALLLGQDANSPHGFYNGQRCHMCLRSDSLHKVMERLANPGVRRLVIVEPGSKRVEGIISLSDVFRFLLG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1412 482 ProSiteProfiles CBS domain profile. 345 403 IPR000644 -
Bisa07g1412 482 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 142 480 - -
Bisa07g1412 482 Pfam CBS domain 434 481 IPR000644 -
Bisa07g1412 482 Pfam CBS domain 348 393 IPR000644 -
Bisa07g1412 482 Pfam Glycogen recognition site of AMP-activated protein kinase 21 106 IPR032640 -
Bisa07g1412 482 Gene3D - 142 323 IPR046342 -
Bisa07g1412 482 SMART cbs_1 168 217 IPR000644 -
Bisa07g1412 482 SMART cbs_1 432 481 IPR000644 -
Bisa07g1412 482 SMART cbs_1 349 397 IPR000644 -
Bisa07g1412 482 CDD E_set_AMPKbeta_like_N 24 100 - -
Bisa07g1412 482 Gene3D Immunoglobulins 19 101 IPR013783 -
Bisa07g1412 482 SUPERFAMILY E set domains 21 101 IPR014756 -
Bisa07g1412 482 SUPERFAMILY CBS-domain pair 148 318 IPR046342 -
Bisa07g1412 482 SUPERFAMILY CBS-domain pair 342 481 IPR046342 -
Bisa07g1412 482 Gene3D - 328 482 IPR046342 -
Bisa07g1412 482 FunFam Sucrose nonfermenting 4-like protein 18 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1412 Bisa-ChrBisa07 36584355 36596698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1412 30 89 Protein tyrosine phosphatase (PTP) family AT3G52180 37.705 6.41e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1412 07 36584355 36596698 Bisa07g1412 07 36584355 36596698 CCT
Bisa07g1412 07 36584355 36596698 Bisa07g1412 07 36584355 36596698 ECH