Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1411 ATGCTTCAGCGGGATTCGGATAGACCCAACAAACGATTATTCGATGATGTGAATCCCGAAGTTTTAATTGCAAAATACGATATGGTTATGAGAACTGCTGCTTCGATGACGAAGAGCTTGATAGTTGTAGTTCTTGAAGGGACGATTGATAAAGGATCAATGGCGCCAACAAGGAAATCCAGAAGTGTGAATAAGCGGTTTTCAAGTTTTAATGAGGCCTCTCCTGATAAAGATGGAGTTAACTCAAATAAAAATAAGCATCGGAAGAAGAAGTTGTCTGATAAATTAGGATCTCAGTGGAGCAAGGAGGAACTAGAGCGTTTTTATGAAGCATACAGGAAGTATGGGAAAGACTGGAAGAAGGTGTCTACTGTTGTACGGAACAGATCCACTGAAATGGTGGAGGCTCTTTACAATATGAATCGGGCATATTTATCCCTTCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGATCATTATAATGTGCTGGTGGGTTCCCCCATCCATTTTTTGGTGGTTGAGTGGGGGTCTGCTGATCAGGAGGAGCTGAAAACAGTTTCCAGCGTGAATTCAGTTCCTCCTTTCATGGAAGGGAGTGATAGTGAAAGGGAGAGCAGTGATGCGCCAGGATCTCAAAAGTCTTTGAAACGGAAGCGTGGGAAAGTTCAGCTTAGTTTCTCAAAAGATTCGGTTCAATGTCATTCATCTGCTTCTAATGACGGTTGTCTCTCTTTATTGAAGAGAAGACACTTTGATTGTAGCCAGCCCCGTGCAGTTGGAAAAAGGACACCCCGCATCCCAGTTTCCCACTCTCACAAGAAAATTGATAGGGAAAATTTTGTTTCACCTATCAAAAGAAGCTTGAAGTCTGAGGGTAATGCTAATGATGATGAAGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGGGATTCTCCCCATATTTCTCAAACTCAATACAGAAGAGCAGATCAGAAATCCTCTCCTGCTCAGAGCTGGGAAAGAATGCACCAACAATCCAAGAGAGCCCGTGCTAAGTTTCATGATGCTTCTGTGGATGAAGAGTGCTTGGAAGGTAGTATAGAAAGTGGGGGAGCTGAAAATGGAGAACATGCTAGAGATACTAGTTCCTTGATGGGCATGGAAGGTGTTGGAACAGTTGAAGTACATCAGAAGGGGAAGAAAATTTACAGAAAGAAAGAGAGAGTGGAAAATGTTAGAAACCATCAGCATGATGATGGTGGGGAAGCTTGTAGTGGCACTGAAGAAGGACTTTACTTTAATTCTTTGAAGGAAAAGGTTGATACTGAGGTCACTAATGCTAAAACTGAGCAATTCTCTCCTAAAGGTCAGAGAAAAAGAAGCAAGAAACTTTTTTTTGGAGATGAAAGCTCTGCTTTGGATGCTTTGCAAACTTTGGCTGATCTGTCTCTTATGATGCCTGGGTCCGCAATGGAATCTGAATCATCTGTCCAGTTGAAGGAAGAAAGAATGGCTGTTGATAATGATGATAAGTCTGCTTTACCTGAAGCTACATTTACAAGCCAAAACAGAGACAAAATTAAACTCCCTGGTCCAAAACAAAAGGTTCTTCATGCAGTTCCTGGAGTAGAGGCTTCAACCTCCAGAAAATCTAAACTTGGACGGGAGTTGGAAAACAATACTAATGCTTCTGCTGAGTCAAAAGAACAGCTTCCAACTCCTGATAGAATATGGAAAAGAAAGCGCAAGTCTGTGGTCTCAAAGATATCAACTGCAAAGCTGGATTCTCATCCAAGTTATACCTTGAATAATGAGGTTGTAATTGATGAAGATAGTAAACCAATGATTAAAGGAAAACACACTGGTCAAGTATTGAAGTCAGTCAGATCATCAGAGGGTTCCTTGTGTAGTGATCTGAAAGATTTGACAGTATCAACTGCAGAAGTTCCACTTGCTAGTGAGGAAAAGCTTTCTGGTTGCTTGTCATCTTATATGGTTCGCAGATGGTGTACTTTTGAATGGTTTTATAGCGCGATTGATTATCCATGGTTTGCCAAAAGGGAGTTTGTGGAATACTTAAATCATGTTGGACTAGGAAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTTATAAAAAGTTCCCTTGGCAAACCTCGGAGGTTTTCTGAGCACTTTCTACATGAAGAAAGACAAAAACTTGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAACTCCGCACTGGCATCAGCGATGGACTGCCCACAGATTTAGCAAGACCTTTATTTGTTGGACAACGAGTGATTGCTATTCATCCCAAATCAAGAGAGGTTCATGATGGGAGTGTGCTTACAGTTGACCATGACAAATGCAGGGTTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTTTTGGATATTGATTGCATGCCTATGAATCTGTTGGATAATATGCCAGAAGCTTTGAGAAGACAGATTGGTACTGGCAAAGTTTCTTGTTTGAGCAAACAGCTACAGATGAATGAAATTTCTAATTTTGGGGGGTGTGCAACATGTGCTTCAGCTGGACACCTGGAGAAGGTACCCACTCCTTCAAGTACTTTGATAAAGCAAGGAAAGGGGGATGTTAATCAGGCCATTGTCCAAGCGAAGGCTGGTACCATTGATAACATTGATACACTTCAAGAAGCATATGCTCAACCTTGTACGTTTACACATCACCGAGCTAGAGAAGCTGATATACATGCCCTTTCCGAACTGGCCCGTGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCACATAATGATGTAATGGAAAACCAAAATGACATAGACAGCTTTAAAGATTCAGAGTCTTTCAAGAAGCATTACGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGGGCAGGTTTCTTCTGCTCTGCTTAATTTGAGGCAACGAAATACTTACACAGGAAACTCTCCGTCACCATGGGTGAAGCCCCGAGAAAGTTTCAACGTTCATGATGACCTTCCGTGTACATTAGATAGTTCTCTAGCACAAGAGGTAGGGTCAACTGTTATTGAAATTATCAAAGGATCCAGGCTAAGAGCACATGCCATGGTGGATGCTGCAATTCAGACATTGTCTTCCACAAAAGAAGGTGAAGATGCTTTCATGAGGATAGGGCAGGTATTGGATTCCATTGATAATCAGCAGTTGGCTTCCAACACGAGGTTATCTGTGATCAGGTCCCAAGAGCAAGTGAATGGCAGGCCTGGTCTCCATGATCAGTCAAATTGCTGTGCATCAGAACCTTTACGTAGCGATGCGTCTGGTCCAAAATTGCTTAATGATTCTGAGAAAGTTGATACCCAAATTCCTTCAGAGCTCATCACTTCCTGTGTTGCTACGTTGTTCATGATTCAGACTTGTACCGAACGACAATACCCTCCGGCTGATGTTGCTCAGATATTGGATTCTGCCGTTTCCAGCCTGCATCCATGCTGTCCTCAAAACCTTCCTATATACAGAGAAATTAAAATGTGCATGGGAAGAATCAAGACCCAGATTTTAGCTCTCATCCCAACATGA 3606 0.4221 MLQRDSDRPNKRLFDDVNPEVLIAKYDMVMRTAASMTKSLIVVVLEGTIDKGSMAPTRKSRSVNKRFSSFNEASPDKDGVNSNKNKHRKKKLSDKLGSQWSKEELERFYEAYRKYGKDWKKVSTVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLVGSPIHFLVVEWGSADQEELKTVSSVNSVPPFMEGSDSERESSDAPGSQKSLKRKRGKVQLSFSKDSVQCHSSASNDGCLSLLKRRHFDCSQPRAVGKRTPRIPVSHSHKKIDRENFVSPIKRSLKSEGNANDDEVAHVAALALTEAAQRGDSPHISQTQYRRADQKSSPAQSWERMHQQSKRARAKFHDASVDEECLEGSIESGGAENGEHARDTSSLMGMEGVGTVEVHQKGKKIYRKKERVENVRNHQHDDGGEACSGTEEGLYFNSLKEKVDTEVTNAKTEQFSPKGQRKRSKKLFFGDESSALDALQTLADLSLMMPGSAMESESSVQLKEERMAVDNDDKSALPEATFTSQNRDKIKLPGPKQKVLHAVPGVEASTSRKSKLGRELENNTNASAESKEQLPTPDRIWKRKRKSVVSKISTAKLDSHPSYTLNNEVVIDEDSKPMIKGKHTGQVLKSVRSSEGSLCSDLKDLTVSTAEVPLASEEKLSGCLSSYMVRRWCTFEWFYSAIDYPWFAKREFVEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLHEERQKLEQYRESVRKHYTELRTGISDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVLDIDCMPMNLLDNMPEALRRQIGTGKVSCLSKQLQMNEISNFGGCATCASAGHLEKVPTPSSTLIKQGKGDVNQAIVQAKAGTIDNIDTLQEAYAQPCTFTHHRAREADIHALSELARALDKKEKLLMELRNAHNDVMENQNDIDSFKDSESFKKHYATVLVQLKEASGQVSSALLNLRQRNTYTGNSPSPWVKPRESFNVHDDLPCTLDSSLAQEVGSTVIEIIKGSRLRAHAMVDAAIQTLSSTKEGEDAFMRIGQVLDSIDNQQLASNTRLSVIRSQEQVNGRPGLHDQSNCCASEPLRSDASGPKLLNDSEKVDTQIPSELITSCVATLFMIQTCTERQYPPADVAQILDSAVSSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 319 345 - -
Bisa07g1411 1201 Pfam Myb-like DNA-binding domain 98 135 IPR001005 -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 499 513 - -
Bisa07g1411 1201 Coils Coil 923 950 - -
Bisa07g1411 1201 PANTHER LIN-9 54 1201 IPR010561 GO:0006351|GO:0017053
Bisa07g1411 1201 ProSiteProfiles Myb-like domain profile. 98 139 IPR001005 -
Bisa07g1411 1201 SMART DIRP_2 678 779 IPR033471 -
Bisa07g1411 1201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 134 IPR017930 -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 316 348 - -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 1091 1110 - -
Bisa07g1411 1201 Pfam DIRP 677 778 IPR033471 -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 546 579 - -
Bisa07g1411 1201 CDD SANT 100 134 IPR001005 -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 191 226 - -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 53 96 - -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 205 219 - -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 1091 1111 - -
Bisa07g1411 1201 SUPERFAMILY Homeodomain-like 94 143 IPR009057 -
Bisa07g1411 1201 Gene3D - 21 152 - -
Bisa07g1411 1201 FunFam Protein ALWAYS EARLY 3 isoform A 56 152 - -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 55 78 - -
Bisa07g1411 1201 SMART sant 96 144 IPR001005 -
Bisa07g1411 1201 MobiDBLite consensus disorder prediction 496 519 - -
Bisa07g1411 1201 Coils Coil 730 750 - -
Bisa07g1411 1201 ProSiteProfiles SANT domain profile. 95 132 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1411 Bisa-ChrBisa07 36571248 36582685 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa07g1411 DIRP 1.4e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1411 07 36571248 36582685 Bisa07g1411 07 36571248 36582685 ECH