Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1404 ATGCAAGACATATTCGGGTCAGTTCGCCGATCACTGGTATTTCGTGCTTCGCCGGAGAACGAGGACCCCTCACTTGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATCCGCAAGTCCAGAGTCTTCTCTAAACCCTCGCCGGCGTCACCGCCATTGCCACCAATCCCCAAGGACCCTGCGCCAATGATCCGATGGCGCAAGGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTAAAGCAGGTTCTGATTGCGGCTAGTAGTGCTTCGAAGGAGAAGGCGCAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATCCCAACATTGTCGTGATTAGAGAGGAGGACACCTTAAATATTCTTCTGGAATTTGTCCCTGGTGGATCCATATCGTCTCTCTTAGGGAAGTTTGGAGCTTTCCCTGAGGCTGTCATTAGAACTTACACGAAGCAGTTACTGCTGGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGATGCATAAAACTTGCAGATTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTTCAGACTGGGCATAGCTTCTCTGCTGATATATGGAGTGTTGGCTGTACTGTGATTGAGATGGCCACTGGAAAGCCTCCTTGGAGCCAGCAGTACCAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACAAAGTCTCATCCACCAATCCCTGATCATCTCTCTGTTGGAGCAAAAGATTTTCTGTTAAAATGTCTGCAGAAGGAACCAATATTGAGGCTATCAGCGTCAGAACTGCTGCAGCATCTCTTTGTTACTGGTGAAGACATGGGTTCATTTTCTGTGTCGTGTACTGCAATGGAAAACTTTGAAGCTCCCTCAGCATCTTGTGCCCCAAATGTCAAAACTGCCTCAGCTGTACATCCCGAGGAAACAGAAAATAAGGAGTTTTGGGGAATGAGCGATGAAGACATGTGTGAGATTGATGACAAAGATGAGTTCTTTGAGGGGCATGACAAATTTACAACTTCTTTGATGTCAGAAAATATTAAGAGTTTCAACCCTATGTGTGATCCCTCTGATGATTGGGATTGCAAATTTGATGCGAGTCCGCAACTGGATCATAGTGGAGTTAGTATCAACATTGATGAAATTCACCCGGGGGCTCTCCATGAGGAGCAGAAAGATTTTTCCTTTTCATGCGAACCATCTGTGTCTGAGGAGGATGATGAGCTCACGGAGTCAAAAATACAAGCTTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCATTATATGAAGAGTTTTACAACAGTGTGATTACATCATGTTCTCCCAATGCGGTTGAAAGCACTAGTGACGAAACTGCTCCAAAATTCTTGAAATTACCTCCTAAAAGTAGGTCACCAAATCGGATGCCAATTGGCACCCCTTCTAAAGCAGTAGACAGTACCGGAAGTCCTGGAAGTAATGCCAGGTCCTCACCAAATGTTGGCAATGCAAATGATCATAGCTCACAGAACATCCCATCACCGCCCCGCAATGAATGGAAAGGATTGCTAGTTGACTCCCAGCAGGAGCCTGGTAGCCCAAGTTTAAGCTTTTCTGAGAGACAAAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTCGAGAGAAAGCGAGAAATGATGCGCCAAGCTGGGATGGGGGGAAAAACATCGTCACCAAAGGATCGAGCCTTGAATCGGCAGAGAGAGAAGACAAGATTTGCATCACCCAGCAAATAA 1932 0.4607 MQDIFGSVRRSLVFRASPENEDPSLGGTLVDKINSCIRKSRVFSKPSPASPPLPPIPKDPAPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVVIREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSVGAKDFLLKCLQKEPILRLSASELLQHLFVTGEDMGSFSVSCTAMENFEAPSASCAPNVKTASAVHPEETENKEFWGMSDEDMCEIDDKDEFFEGHDKFTTSLMSENIKSFNPMCDPSDDWDCKFDASPQLDHSGVSINIDEIHPGALHEEQKDFSFSCEPSVSEEDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSVITSCSPNAVESTSDETAPKFLKLPPKSRSPNRMPIGTPSKAVDSTGSPGSNARSSPNVGNANDHSSQNIPSPPRNEWKGLLVDSQQEPGSPSLSFSERQRKWKEELDQELERKREMMRQAGMGGKTSSPKDRALNRQREKTRFASPSK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1404 643 MobiDBLite consensus disorder prediction 527 568 - -
Bisa07g1404 643 ProSiteProfiles Protein kinase domain profile. 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1404 643 MobiDBLite consensus disorder prediction 503 643 - -
Bisa07g1404 643 Coils Coil 99 126 - -
Bisa07g1404 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Bisa07g1404 643 Coils Coil 594 614 - -
Bisa07g1404 643 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Bisa07g1404 643 Gene3D Transferase(Phosphotransferase) domain 1 65 362 - -
Bisa07g1404 643 MobiDBLite consensus disorder prediction 626 643 - -
Bisa07g1404 643 FunFam Mitogen-activated protein kinase kinase kinase 2 65 352 - -
Bisa07g1404 643 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 51 330 - -
Bisa07g1404 643 SUPERFAMILY Protein kinase-like (PK-like) 65 325 IPR011009 -
Bisa07g1404 643 MobiDBLite consensus disorder prediction 592 614 - -
Bisa07g1404 643 Pfam Protein kinase domain 67 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1404 643 SMART serkin_6 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1404 643 CDD STKc_MAPKKK 65 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1404 Bisa-ChrBisa07 36498623 36503511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1404 1 643 MAP Kinase Kinase Kinase AT1G54960 57.598 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa07g1404 Pkinase 1.2e-65 CL0016