Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1380 ATGTGTACAAGTCAATATAGCATTTTTATTGCTCCGGAATCGTCCCAGCGCATATTTATGACAACTTTTTCTGCTTTTTTGGTACTTCCCTACCTTAGGTTCGTTCAAGAAAACATCATTAATCCTCGCGAAATCTCTGTCCTCAATTTTGCAGAGCAGATCATCACCTGTTTCAGAAGGATGGATCATCAAGGGCATAGCCAGAACCCATCTATGGGGGTTGGTGGCGGAGCTCAAATGCCTTATGGTTCTAACCCATACCAGACAAACCAAATAACTGCAACACCGGGATCTGCTGTTACGTCGGTTGGGACCATTCAGTACAGTGGTCAGCCTGCTGGATCTCAAATGGGACAACATCAACTTGCTTATCAGCATATTCACCAGCAACAGCAGCAGCAACTTCAGCAACAACTTCAGTCCTTTTGGGCAAATCAGTACCAAGAAATCGAGAAGGCGACTGATTTCAAGAATCACAGCCTTCCCTTGGCGAGGATCAAGAAGATAATGAAGGCTGATGAGGATGTTCGAATGATCTCGGCTGAGGCACCGGTCATATTTGCAAGGGCATGTGAAATGTTCATTTTAGAGTTAACACTGCGTTCTTGGAATCACACCGAAGAGAACAAGAGGAGAACACTTCAAAAGAATGACATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTAGTTGACATCGTGCCCCGGGAGGACTTGAAAGATGAAGTTCTTGCATCAATCCCTAGAGGAACAATGCCTGTTGCGGGCCCTGCTGATTCACTTCCTTATTGCTATATGCCACCACAACATCCACCACAAGTTGGCACTGCCGGTGTCATAATGGGTAAGCCCGTGATGGACCCATCCATTTTTACTCAACAGTCTCATCCCTACATGGCACAGCAGATGTGGCCACAGCCACCGGAGCAACGACAATCATCTCCAGATCATTAG 960 0.4583 MCTSQYSIFIAPESSQRIFMTTFSAFLVLPYLRFVQENIINPREISVLNFAEQIITCFRRMDHQGHSQNPSMGVGGGAQMPYGSNPYQTNQITATPGSAVTSVGTIQYSGQPAGSQMGQHQLAYQHIHQQQQQQLQQQLQSFWANQYQEIEKATDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADSLPYCYMPPQHPPQVGTAGVIMGKPVMDPSIFTQQSHPYMAQQMWPQPPEQRQSSPDH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1380 319 Pfam Core histone H2A/H2B/H3/H4 121 223 IPR007125 GO:0003677
Bisa07g1380 319 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 119 261 - -
Bisa07g1380 319 Gene3D Histone, subunit A 122 238 IPR009072 GO:0046982
Bisa07g1380 319 FunFam Nuclear transcription factor Y subunit gamma 125 238 - -
Bisa07g1380 319 SUPERFAMILY Histone-fold 131 232 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1380 Bisa-ChrBisa07 36171319 36176103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1380 61 306 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.538 5.92e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa07g1380 CBFD_NFYB_HMF 8.2e-18 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1380 07 36171319 36176103 Bisa07g1380 07 36171319 36176103 CCT
Bisa07g1380 07 36171319 36176103 Bisa07g1380 07 36171319 36176103 ECH