Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1371 ATGGCGTTAGAAGCAGTGGTGTATCCTTATCATTATCCTCAGGACTACCCCTTTGGCTATGGCGCCTCCAAGGACCTCTACGCCGTCTTACCAGGCGGAGCAGGACCCATCTGCTCCTACGACGACGACTTTAGCCTCGCAAAACAGGCGGAGCATGCGGGTTTTCTCGAGAACCAAACAGAAAATTTTTGTTACCCAGATTGGGCTGTTTGCTCTGCTTCTCCCGCACCATTGTTACTGAACGAATTGCATCTCTCGAATCCCTCCTCTGTCTCTGAGACTAGTAATGCGAATAACGCAACGCCAAGTGAAAATAATTTCGATAATATTAATGCCTCGAATTCTCGACACAAGAGACGCAGAGCCAGAACGAGAAAGAACCAGGAGGAGATTGAGAACCAGAGAATGACTCACATTGCAGTGGAGCGCAATCGAAGGAAGCAAATGAATGAGTATCTCTCTGTTCTTCGCTCTCTCATGCCCGACTCCTACGTCCAAAGGGGAGATCAAGCTTCGATAATAGGAGGGGCGATTAATTATGTGAAGGAGCAAGAGCAGACGCTGCAGTATCTGGTGGGTCACAGAGAAACAGAGGAGACAGAAACAGGGAATCAGATACCATTCTCAGAGTTCTTTGCGTTTCCTCAGTATTCGACGAGTTCAGGTGGAGGGGGAGAGGGAAAGACAGAGTGGGGAATAGGAGACATAGAAGTAACAATGGTGGAGAACCATGCTAGTGTGAAGATAAGGACGAGGAAGAGGGAGAAGCAGCTGGCGAAGATGGTGACTGCATTGCAGGCCATGCGTCTCACAGTGTTGCATCTCAACGTCACCAGCAGTGAGGATGTCGTCCTCTATTGCATCAGCATCAAGATAGAAGAAGAATGTAAGCTGGGATCAGTGGATGAGATAGCAACAGCAGTACACGAAATGTTGGAAAGGATTCAACGAGACTGA 957 0.4838 MALEAVVYPYHYPQDYPFGYGASKDLYAVLPGGAGPICSYDDDFSLAKQAEHAGFLENQTENFCYPDWAVCSASPAPLLLNELHLSNPSSVSETSNANNATPSENNFDNINASNSRHKRRRARTRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINYVKEQEQTLQYLVGHRETEETETGNQIPFSEFFAFPQYSTSSGGGGEGKTEWGIGDIEVTMVENHASVKIRTRKREKQLAKMVTALQAMRLTVLHLNVTSSEDVVLYCISIKIEEECKLGSVDEIATAVHEMLERIQRD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1371 318 ProSiteProfiles ACT domain profile. 246 318 IPR002912 -
Bisa07g1371 318 MobiDBLite consensus disorder prediction 88 128 - -
Bisa07g1371 318 MobiDBLite consensus disorder prediction 88 112 - -
Bisa07g1371 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 184 IPR011598 GO:0046983
Bisa07g1371 318 PANTHER MAX DIMERIZATION, MAD 88 315 - -
Bisa07g1371 318 Pfam Helix-loop-helix DNA-binding domain 134 183 IPR011598 GO:0046983
Bisa07g1371 318 Coils Coil 114 134 - -
Bisa07g1371 318 Gene3D - 114 201 IPR036638 GO:0046983
Bisa07g1371 318 SMART finulus 139 190 IPR011598 GO:0046983
Bisa07g1371 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 198 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1371 Bisa-ChrBisa07 35981414 35982574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1371 1 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 45.426 6.43e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1371 HLH 2.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1371 07 35981414 35982574 Bisa07g1371 07 35981414 35982574 CCT
Bisa07g1371 07 35981414 35982574 Bisa07g1371 07 35981414 35982574 ECH