Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1369 ATGGCGTTAGAAGCAGTGGTGTATCCTTATCATCATCCCCAGGACTACCCTTTTGGCTATGGCGCCTCCAAGGACCTCTACGCCATGTTACCAGGCGGAGCAGGAGCCCTCTGCTCCTACGACGACGACTTTAGCCTCGCAAAACAGGAGGAGCATGCGGGTTTTCTCGAGACCCAAACAGAAAATTTTTTTTACCCAGATTGGGCTGTTTGCTCTGCTTCTCCCCCACCGTTGTTACTGAACGAATTGCATCTCTCGAATCCCTCCTCTGTTTCTGAGACTAGTAATGCGAATAATGCAACGCCAAGTGAAAATAATTTCGATAATATTAATGCATCGAATTGTCGTCCCAAGAGACGCAGAGCCAGAACGAGAAAGAACCAGGAGGAGATTGAGAACCAGAGAATGACTCACATTGCAGTGGAGCGCAATCGAAGGAAGCAAATGAATGAGTATCTCTCTGTTCTTCGTTCTCTCATGCCCGACTCCTACGTTCAAAGGGTAATCTTCTTTCCATCTTGTTTAGTCTTTGGATTTGTGGAAATGGGTTAA 552 0.4674 MALEAVVYPYHHPQDYPFGYGASKDLYAMLPGGAGALCSYDDDFSLAKQEEHAGFLETQTENFFYPDWAVCSASPPPLLLNELHLSNPSSVSETSNANNATPSENNFDNINASNCRPKRRRARTRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRVIFFPSCLVFGFVEMG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1369 183 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 183 IPR011598 GO:0046983
Bisa07g1369 183 Gene3D - 127 168 IPR036638 GO:0046983
Bisa07g1369 183 MobiDBLite consensus disorder prediction 89 113 - -
Bisa07g1369 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 164 IPR036638 GO:0046983
Bisa07g1369 183 PANTHER MAX DIMERIZATION, MAD 89 167 - -
Bisa07g1369 183 Pfam Helix-loop-helix DNA-binding domain 134 161 IPR011598 GO:0046983
Bisa07g1369 183 MobiDBLite consensus disorder prediction 89 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1369 Bisa-ChrBisa07 35887130 35887681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1369 109 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 71.186 5.74e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1369 HLH 2.7e-07 No_clan