Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1346 ATGCCTCGGATACTTCTTCTTTCTCACACTCTGTTTCTTCCTCTTGTCCCAAATGTTAATGCGTACGCCCATTGTGGGTTTTGTGTTCTGGAGCATTTGCTGCGACATCTGATATGGCCTCTATGTGTATCTGATTTGATTTCTCGCTTTGCCTCTTTCTCTTTCTCCCTTGACGTATTACATGGTTCATTTTCCGTTATTGTTCAGAAGCTTACACTTGGTACTCTGTATATGGTAATGGACATTCGAAAGAGTTGTATTCACAAACCAAAGAAGGTCCCAGTGAATGATGCTTTCAATGTACAACATAAAAGACGAGGCTTTTTATTTCCTTCCTCTGCTTCCGCTCAAGAACTGACACATTTGAACGAGAAAAAAGACTCTTCATCTCCCAAAGGAGTTTTAGAAGCCTCCGTTAATGGCTTTGATGAGACTGGTTGTTCTAATTCCAAGACATTATTATTATGTCAGTGGTGCAAGATTTTCAAACAGGCCGAACTAAGATCGTTGAAGCGTCTGACGTCCTTCCCTCCAAAAATAACCAAAGAAAAAAGCAGAAGCACCAGAGAAAATCAGGTGTTCAGTGATATACACAGCTTCAGGTCTCCACTGGTGAATTTCACCCTCTCAGACCTCAGAAATGCAACCAGCAATTTTAGCAATGAGAACATAATTGGAAGGGGTGGTTATTCTGAAGTGTATAAGGGTCGTCTTCAAGACGGGGAACTAATAGCTGTAAAGCGATTGAGCAAAGGGACAGCAAATGAGAGGATAGCAAGCTTTCTATCTGAGCTAGGTATTATTGCTCATGTTGACCATCCTAACACTGCCAAACTTATTGGATGTGGTGTGGAAGGAGGAATGCACCTTGTCTTCCAACTATCTCTACTCGGGAGCCTGGGATCTCTTCTTCACGGGTCAAATGGTAACAAATTGGATTGGAGTAGAAGGTATAAGATTGCCCTGGGAATAGCTGATGGTCTCCTCTATCTACATGAGAGTTGCCCCAGAAGGATCATTCATAGAGATATTAAGGCAGAGAATATTCTGCTCACACAGAACTTTGAGCCTCAGATTTGTGATTTTGGGCTGGCAAAGTGGTTACCCACACAGTGGACTCATTATAATGTATCAAAATCTGAAGGCACATTTGGTTATTTTGCTCCTGAATATCTCATGCATGGCACAGTGGATGAGAAAACTGACATTTATTCGTTCGGGGTTCTACTTTTAGAGCTTATTACTGGACGCCAAGCTTTGAATCACTTGCAGCAGAGTGTGGTCATATGGGCAAAGCCTATGCTTGACGCCAATAATGTCCAAGACCTTGTTGATCCTTGTCTTGATGGCAACTATGACCCCCAACAGATGAACTGTGTCGTTTTGACTGCATCACTGTGTGTTGAGCAGTCTCCAATCTCACGTCCTCGCATGAGTCAGGCACGTTGTAATGCTGCTAAGAGACATTTAAGAAAATTGCGTGCTTTGCAATTAGCGACTAGCGGAGTCTTGAGAGTCCAAAGTCCAAACCGAGGCAAGGACAGAGAAGCGAAGGTAAAGGAGGCGTGTGTGTTAAGGTCAAAATTGCTCAACAACCACCAAGTAAAACGGAAACGCCGTGGTTCTCCGCCGTTGTTCCCGGCGATTCCCGACGTCTAA 1659 0.4346 MPRILLLSHTLFLPLVPNVNAYAHCGFCVLEHLLRHLIWPLCVSDLISRFASFSFSLDVLHGSFSVIVQKLTLGTLYMVMDIRKSCIHKPKKVPVNDAFNVQHKRRGFLFPSSASAQELTHLNEKKDSSSPKGVLEASVNGFDETGCSNSKTLLLCQWCKIFKQAELRSLKRLTSFPPKITKEKSRSTRENQVFSDIHSFRSPLVNFTLSDLRNATSNFSNENIIGRGGYSEVYKGRLQDGELIAVKRLSKGTANERIASFLSELGIIAHVDHPNTAKLIGCGVEGGMHLVFQLSLLGSLGSLLHGSNGNKLDWSRRYKIALGIADGLLYLHESCPRRIIHRDIKAENILLTQNFEPQICDFGLAKWLPTQWTHYNVSKSEGTFGYFAPEYLMHGTVDEKTDIYSFGVLLLELITGRQALNHLQQSVVIWAKPMLDANNVQDLVDPCLDGNYDPQQMNCVVLTASLCVEQSPISRPRMSQARCNAAKRHLRKLRALQLATSGVLRVQSPNRGKDREAKVKEACVLRSKLLNNHQVKRKRRGSPPLFPAIPDV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1346 552 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 195 294 - -
Bisa07g1346 552 SUPERFAMILY Protein kinase-like (PK-like) 201 485 IPR011009 -
Bisa07g1346 552 Pfam Protein tyrosine and serine/threonine kinase 222 430 IPR001245 GO:0004672|GO:0006468
Bisa07g1346 552 ProSitePatterns Protein kinases ATP-binding region signature. 225 247 IPR017441 GO:0005524
Bisa07g1346 552 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 296 494 - -
Bisa07g1346 552 PANTHER OS08G0249100 PROTEIN 127 481 IPR046958 -
Bisa07g1346 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Bisa07g1346 552 Gene3D Phosphorylase Kinase; domain 1 179 293 - -
Bisa07g1346 552 ProSiteProfiles Protein kinase domain profile. 219 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1346 552 SMART serkin_6 219 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1346 552 Gene3D Transferase(Phosphotransferase) domain 1 297 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1346 Bisa-ChrBisa07 35462441 35467897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1346 190 500 Receptor kinase-like Gene Family AT1G53420 39.062 2.45e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa07g1346 PK_Tyr_Ser-Thr 2.6e-41 CL0016