Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1317 ATGGGGTGTGTGTTTAGTCGAGAAGGGTCGTCGGAGAAAACCTCTGAGGTGAAAGAGGAGAGGAATTTGAGCGCTGAATCGAACAGGAAGATAGATGAAGTCTCCACAAGGAAAGCTGAGAGGAACGTGGTTGAGGTTCAGAACGGTGATAACCAGAAGGTAGAGACGGATGGTGATGATGGGGTGAAGGTCCAGCGGCCACGGGGCGAAAGAAGAAGATCCAAGCCAAACCCAAGGCTAAGTAATCCTCCCAAACATTTGCGGGGAGAGCAAGTAGCAGCTGGGTGGCCTCACTGGCTTACGGCAGTGTGTGGGGAAGCACTTAATGGGTGGATTCCTCGGAAGGCTGATACATTTGAGAAAATTGATAAGATTGGACAAGGAACATATAGCAATGTGTACAAAGCTAAGGACATGTTGACTGGTAAAATTGTTGCACTAAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTAAAGTTCATGGCCAGAGAAATTCTTATTTTGCGAAGGTTGGATCATCCCAATGTTGTTAAGTTGGAAGGTTTAGTTACATCGAGAATGTCCTGTAGTTTGTATTTGGTGTTTGATTACATGGAACATGATTTAGCTGGACTTGTCGCAAGCCCAGAAATCAAGTTCACAGAGCCTCAGGCCAAATGTTACATGCACCAACTATTATCAGGACTTGAGCACTGTCATAATCGTCTAGTGCTACACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGGAGGAATACTTAAGATAGCTGACTTTGGATTGGCCTCTTTCTTTGATCCAAACCGCAAGCTCCCCATGACTAATCGTGTAGTTACACTTTGGTATCGACCTCCTGAATTGTTACTTGGTGCCACAGAATATGGTGTGGGTGTGGACCTTTGGAGTGCAGGTTGCATTCTAGGAGAGTTACTGGCAGGGAAGCCAATTATGCCTGGTCGCACGGAGGTGGAGCAATTGCATAAGATATACAAATTGTGTGGTTCACCTTCAGATGAGTATTGGAAGAAGTCAAAGCTGCCTAATGCTACTTTGTTTAAACCCCGAGAGCCATACAAGAGATGCATAAGAGAAACATTTAAAGATTTTCCACCTTCTGCTCTTACACTTATGGATACTCTTCTTGCAATTGATCCAGCAGAACGGAAGACTGCCTCAGATGCATTAAGAAGTGAGTTCTTCACCACAGAACCTTATGGCTGTGATCCTTCTAGTCTTCCAAAATATCCCCCTAGCAAGGAAATCGATGCTAAACGACGTGATGATGAAGCAAGGAGACTACGAGCTGCAGGCAAAGCTCAAGCTGATGGTGCAAAGAAACCACGAGCACGTGATCGTGCTAAAGCTAATCCTGCTCCTGCTGCCAATGCTGAGCTTCAATCCAATATTGATAGAAGGCGTCTCATCAGCCGTGCAAATGCAAAGAGCAAGAGTGAAAAGTTCCCTCCACCACATCAAGATGGACAGCTTGGCTTTCCTTTGGGATCTTCACATCATATAGATGCAGCCAACGTCCCTCCTGATGTCTCCTTCGATGCCGCCTCATTTGTCCATTCAAAAGAACCATTCCAGGCTTGGTCAGGTCCCATTGTTGCGCCCAAGCAGAAGAAGCACGCTTCAGGCAATTCAGTGGATTCATCAAAACAACATACAGGTGCCCTCAAGGATAAGGTTAAAGGAAAGAAACTCAGAGCTTAG 1725 0.4522 MGCVFSREGSSEKTSEVKEERNLSAESNRKIDEVSTRKAERNVVEVQNGDNQKVETDGDDGVKVQRPRGERRRSKPNPRLSNPPKHLRGEQVAAGWPHWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMEHDLAGLVASPEIKFTEPQAKCYMHQLLSGLEHCHNRLVLHRDIKGSNLLIDNGGILKIADFGLASFFDPNRKLPMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKDFPPSALTLMDTLLAIDPAERKTASDALRSEFFTTEPYGCDPSSLPKYPPSKEIDAKRRDDEARRLRAAGKAQADGAKKPRARDRAKANPAPAANAELQSNIDRRRLISRANAKSKSEKFPPPHQDGQLGFPLGSSHHIDAANVPPDVSFDAASFVHSKEPFQAWSGPIVAPKQKKHASGNSVDSSKQHTGALKDKVKGKKLRA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1317 574 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 1 88 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 533 574 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 473 491 - -
Bisa07g1317 574 CDD STKc_CDK9_like 119 403 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 52 67 - -
Bisa07g1317 574 SUPERFAMILY Protein kinase-like (PK-like) 113 408 IPR011009 -
Bisa07g1317 574 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Bisa07g1317 574 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 421 456 - -
Bisa07g1317 574 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 11 44 - -
Bisa07g1317 574 MobiDBLite consensus disorder prediction 409 516 - -
Bisa07g1317 574 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1317 574 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Bisa07g1317 574 Gene3D Transferase(Phosphotransferase) domain 1 202 442 - -
Bisa07g1317 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bisa07g1317 574 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1317 574 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1317 Bisa-ChrBisa07 34785309 34789680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1317 111 443 Core Cell Cycle Gene Families AT5G10270 51.862 4.83e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa07g1317 Pkinase 1.6e-66 CL0016