Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1287 ATGGCTCCAAGAACCACTCTTCCTCTTCACTTACCCTTCCCTTCTTTTGATGCTTATCATCATCACTTGCCACTCCCTCCTCCAAATCTCTTGCACCCATTGTTGCACCACAAAGATGAACCCCACAAGCAGGAAGAAGATAGCATGAGCTTGGAGATCAGTGACAGAGATACGGAATTAGGAGATCATCATCATCATGAGCATGAACATGAGCTGACCGACTCCTGGACCCATGACGAAGTGCTTGCGCTTTTGAGGATCAGATCTAGCATGGACACTTGGTTCCCTGAGCTCACTTGGGAACATGTTTCAAGGAAGTTAGCAGAGGTTGGATTTAAGAGGAGTGCAGAAAAATGCAAAGCCAAGTTTGAAGAAGAAACTAGATACTTCAACAATAACAGTAACAGCAACATCCATTACACCAAGACGACGACTACTACTACTGCTGCTAATAATAATAGTAATAATAATTACCGCTTTATTAGTGAGCTCGAACAGCTCTACCAGCAACAACAACAAGAAGAAGCACCTCCGAATCCTGAACTAGGCAACAACATCATGGGTCACGCATTAGTAGAAGATGGCTCCAGAAACAACGTCGCCTCGGCGAGAAAACCATGCGAGGAGAGTGACGAGAAGAAATCAAAGCGAAGGAGGCATAAGCGTAACAAGTTTGAGATGCTCAAGGGATTCTGCGAGAGCATTGTGAACAAGATAATGGCTCAACAGGAACAGATGCACAACAAGCTCCTCGAGGACATGATCAGGAGAGACGAAGACAAGTTCGCGAGAGAGGAAGCTTGGAAGAAGCAAGAGATCGAGAGGATGAACAGAGAGCTCGAAATGATGGCCAGAGAACAGGCTCTGGCCGGCGACAGACAAGCAGCCATAATCGAATTCTTGAAGAAATTCTCAGATCAATGCCGAATTGGAAAAGAAAATCCTAATCTGAAAACCGCATCGAACGGTTCAAATTCAAATCCAAATCCAAATTACTCCCCGGTACACTCACAAAACCCTAATCCAGCGGACCAAAACCCTAATTGCTCAATGGAAGTTCCTTCTTCTTCCGATTGTGCTCGGGTCCAGCAGAACCCCAACTGTGGAATTAATTGCGAGAAAGATGAAACCGGAAGACGATGGCCAAGAGAGGAAGTGTTGGCGCTCATAAACCTGAGGTGCAGCATTGTGAATAACAGCAATAACGAAGAAGAGAAGGAAGGAGGAAACAGAGGACCTCTGTGGGAGAGAATATCGAGAGGGATGAGGGAATTGGGGTATGAGAGGAGTGGGAAGAGATGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGGAAAACCAAGCATGTGGGCAAGAAGAGGTCGCTTCACTCTAGGACCTGTCCCTACTTCCATCAACTCAGCACTCTGTATTCTCAGGGAAAACTCGTCGATAACATTAACAATGCCGAATCTGATCACAATCACGATTCCCCTCTGCTTCACTTTGATGCATCCGGATCAGGTCAAAACACACCGGACTTTCATCCTCACTCGTAA 1542 0.4578 MAPRTTLPLHLPFPSFDAYHHHLPLPPPNLLHPLLHHKDEPHKQEEDSMSLEISDRDTELGDHHHHEHEHELTDSWTHDEVLALLRIRSSMDTWFPELTWEHVSRKLAEVGFKRSAEKCKAKFEEETRYFNNNSNSNIHYTKTTTTTTAANNNSNNNYRFISELEQLYQQQQQEEAPPNPELGNNIMGHALVEDGSRNNVASARKPCEESDEKKSKRRRHKRNKFEMLKGFCESIVNKIMAQQEQMHNKLLEDMIRRDEDKFAREEAWKKQEIERMNRELEMMAREQALAGDRQAAIIEFLKKFSDQCRIGKENPNLKTASNGSNSNPNPNYSPVHSQNPNPADQNPNCSMEVPSSSDCARVQQNPNCGINCEKDETGRRWPREEVLALINLRCSIVNNSNNEEEKEGGNRGPLWERISRGMRELGYERSGKRCKEKWENINKYFRKTKHVGKKRSLHSRTCPYFHQLSTLYSQGKLVDNINNAESDHNHDSPLLHFDASGSGQNTPDFHPHS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1287 513 ProSiteProfiles Myb-like domain profile. 373 442 IPR001005 -
Bisa07g1287 513 FunFam Trihelix transcription factor GT-2 76 132 - -
Bisa07g1287 513 MobiDBLite consensus disorder prediction 312 356 - -
Bisa07g1287 513 ProSiteProfiles Myb-like domain profile. 75 127 IPR001005 -
Bisa07g1287 513 MobiDBLite consensus disorder prediction 482 513 - -
Bisa07g1287 513 MobiDBLite consensus disorder prediction 498 513 - -
Bisa07g1287 513 MobiDBLite consensus disorder prediction 196 222 - -
Bisa07g1287 513 CDD GT1 379 449 - -
Bisa07g1287 513 Pfam Myb/SANT-like DNA-binding domain 379 470 IPR044822 -
Bisa07g1287 513 Pfam Myb/SANT-like DNA-binding domain 74 137 IPR044822 -
Bisa07g1287 513 PANTHER FI21293P1 46 491 - -
Bisa07g1287 513 Gene3D - 381 447 - -
Bisa07g1287 513 Gene3D - 76 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1287 Bisa-ChrBisa07 33616055 33617968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1287 76 474 Trihelix Transcription Factor Family AT5G28300 43.791 8.75e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa07g1287 Myb_DNA-bind_4 1.6e-19 CL0123